KEGG   Brassica napus (rape): 106445271
Entry
106445271         CDS       T04128                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106445271
   03083 Polycomb repressive complex
    106445271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106445271
Enzymes [BR:bna01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106445271
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106445271
   HDAC complexes
    Sin3A-HDAC complex
     106445271
    BRAF-HDAC complex
     106445271
    REST complex
     106445271
    SHIP complex
     106445271
    MiDAC complex
     106445271
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106445271
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106445271
  Chromatin remodeling factors
   NuRD complex
    106445271
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106445271
NCBI-ProteinID: XP_048602133
LinkDB
Position
C1:complement(50198170..50201899)
AA seq 502 aa
MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGI
DDESYHLLFKPIMGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVEDKMPEHEYYEYFGPDYTLHVAPSNMEN
KNSRQMLEVIRNDLLQNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKRWDADSDMDV
DDDRKPIPSRVKREAVEPDGKDKDGVKGVMERGKGFEVGMEESGSTTKVSGVNSVGMEEA
GVKMEEEGTTNKSGGDQVFPKT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggacaccggaggaaactcgctggcttctggaccagacggtgtgaagaggaaagtgtgc
tacttctacgacccagaggttgggaactactactacggccaaggccaccccatgaagcct
caccgcatccgcatgacgcacgccctcctcgctcactacggtctcctccagcacatgcaa
gtcctcaagcctttccccgcccgtgaccgtgacctctgccgcttccacgccgacgactac
gtctcctttctccgcagcattacgcccgagactcagcaggatcagatccgccagctcaag
cggttcaacgttggtgaagactgtcctgtctttgacggtctttattccttttgtcagacg
tatgctggtggctctgttggtggttctgttaagctgaaccatgggctttgtgatattgct
attaactgggctggtggtcttcatcatgctaagaagtgtgaggcctctggcttctgctac
gttaatgatatcgtcttagctatcctggagctgcttaagcagcatgagcgtgttctgtac
gttgatatcgacatccaccacggggacggagtggaggaggcattttacgctaccgacagg
gtcatgaccgtctcgttccataagttcggagactacttccccggtacaggccacatacaa
gacattggctacggaagtggaaagtactattcactcaacgtaccactggacgatggtatc
gacgatgagagctatcatctcttgttcaaacccatcatggggaaagtgatggaaattttc
aaaccaggtgcggtcgtactccaatgcggcgctgattccttgtctggcgataggctggga
tgctttaacctctccatcaaaggccatgccgagtgtgtcaagttcatgagatctttcaac
gttccgttactgctccttggtggtggtggttacaccatccgcaacgttgcgcgttgctgg
tgctacgagactggagttgcgcttgggatcgaggtcgaggacaagatgccggagcatgag
tactatgagtactttggtccggactatacgctccacgttgctccgagtaacatggagaac
aagaactctcggcagatgctggaagtgattcgtaatgacttgcttcagaatctctcgaag
cttcagcatgctcctagtgtgccgtttcaggaaaggccgccagatactgagactcctgag
gtagatgaagaccaagaagatggagataaaagatgggatgcagattctgacatggatgta
gatgatgatcgtaaacctataccaagcagagtgaaaagagaagctgttgagcctgatgga
aaggacaaggatggagtgaaaggagtgatggagcgtggaaaaggttttgaggtgggcatg
gaggagagtggaagcaccaccaaggtttcaggagtaaactcagtgggaatggaggaagca
ggtgtgaaaatggaagaggaaggcacaacaaacaagtcagggggagatcaagtgtttcct
aaaacataa

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