Brassica napus (rape): 106445346
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Entry
106445346 CDS
T04128
Name
(RefSeq) beta-hexosaminidase 1 isoform X2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
bna00513
Various types of N-glycan biosynthesis
bna00520
Amino sugar and nucleotide sugar metabolism
bna00531
Glycosaminoglycan degradation
bna00600
Sphingolipid metabolism
bna00603
Glycosphingolipid biosynthesis - globo and isoglobo series
bna00604
Glycosphingolipid biosynthesis - ganglio series
bna01100
Metabolic pathways
bna04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106445346
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106445346
00513 Various types of N-glycan biosynthesis
106445346
00531 Glycosaminoglycan degradation
106445346
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
106445346
00604 Glycosphingolipid biosynthesis - ganglio series
106445346
00511 Other glycan degradation
106445346
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106445346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106445346
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
106445346
Chaperones and folding catalysts [BR:
bna03110
]
Intramolecular chaperones
Others
106445346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
106445346
NCBI-ProteinID:
XP_013742328
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Position
A4:complement(2893679..2897653)
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AA seq
550 aa
AA seq
DB search
MALNLPLLNTLLILLSLSTTITTSLPSPSPVTSHQGSPPYLWPLPAEFTSGEETLSVDPS
LSLTVAGNGGGSPILRAAFDRYMGMIFKHAYNRASSLLTRIRFLSMVEYDITSLKIIVHS
DSEELQLGVDESYTLMVSKKNELSIVAAATIEANTVYGALRGLETFSQLCAFDYLTKSVQ
IYKAPWFIQDTPRFQYRGLLIDTSRHFLPVDVIKQITESMSYAKLNVLHWHIVDEQSFPF
ETPTYPNLWKGAYSRWERYTVEDASEIVRFAKMRGINVMAELDVPGHAESWGTGYPDLWP
SPSCREPLDVTKNFTFDVISGILADMRKIFPFEFFHLGGDEVNTDCWKNTTHVKEWLHGR
NFTSKDAYKYFVLRAQQIAISKNWTPVNWEETFSSFGKDLDPRTVVQNWLVSDICQKAVA
KGFRCIFSNQGYWYLDHLDVPWDEVYNTEPLNGIHDPSQQKLVIGGEVCMWGETADTSVV
LQTIWPRAAAAAERMWSTREAVSKGNITLTALPRLHYFRCLLNNRGVPAAPVDNWYARRP
PSGPGSCYAQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaatcttcctcttcttaatacccttttgatactcctctctttatccaccacc
atcactacatctcttccatcgccgtctcccgtgactagtcaccaaggctctcctccttat
ctatggccattaccggcggaatttacctccggagaagaaaccctctcggtggatccttcc
ctttctctgaccgtagctggaaacggcggcggatctccgatccttagagctgcattcgac
aggtacatggggatgatcttcaagcacgcttacaatagagcttcttctctcttgacgaga
attagattcctgagtatggttgagtatgacatcacttctctcaagatcattgttcactcg
gattctgaagagcttcaattgggtgtggatgagagttatacattgatggtgtctaagaag
aatgagctatctattgtagcagctgcaaccattgaggctaatactgtttatggtgctctt
agaggattggagacgtttagccagttgtgtgcttttgattacttgaccaaatctgtgcaa
atatataaagcaccctggtttattcaagacacacctagattccagtaccgtggtctgcta
atagatacatcaagacattttctaccagttgatgttatcaagcagatcactgaatctatg
tcatacgctaaacttaacgtcctgcattggcacattgtagacgagcaatcgtttcctttt
gagactcctacgtatcctaatctgtggaaaggagcttattcgagatgggagcgttataca
gttgaggatgcctctgagattgtcaggtttgccaaaatgagaggtattaacgtcatggct
gaactagatgttcctggccatgctgaatcatggggaactggataccctgatctttggccc
tctccctcttgccgagagccccttgacgttactaaaaactttacattcgatgtgatctct
ggcattttagcagatatgagaaagatattcccatttgagtttttccacttgggcggtgat
gaagtaaatacagattgctggaagaacacaactcatgtcaaggaatggcttcatggtcgc
aacttcacttctaaggacgcatataagtactttgtactcagagcacaacagatagctata
tctaaaaactggacacccgtcaactgggaagaaacattcagttcgtttggaaaagatctt
gatccacggaccgtggtgcaaaactggctagtatctgatatatgtcaaaaggcggtagca
aaaggattcagatgcattttcagtaaccaaggatattggtacctcgaccatctagatgtc
ccatgggacgaggtttacaacaccgagcctctaaatggaatccatgatccttctcagcaa
aagcttgtgattggtggagaagtttgcatgtggggtgaaacagctgatacatccgttgta
cttcagacaatttggcctagagctgcagcagctgcagaacggatgtggagcactagagaa
gctgtgtcaaagggaaacataacgctaaccgcattgcctcgtttacactacttcaggtgt
ttactgaataaccgtggggttccagcagctccagttgataactggtacgcacgaagacca
ccctctggacctggctcttgctatgctcagtga
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