Brassica napus (rape): 106445387
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Entry
106445387 CDS
T04128
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106445387
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106445387
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106445387
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106445387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
Cnd1
Adaptin_N
TTI1
INTS1_R4
HEAT_Maestro
MMS19_N
UTP20
HEAT_DAAF5
TPR_TTI1_C
Sec7-like_HUS
Npa1
TPR_TTI1_N
MMS19_C
SEN1_N
Motif
Other DBs
NCBI-GeneID:
106445387
NCBI-ProteinID:
XP_013742385
LinkDB
All DBs
Position
C9:complement(9957367..9964676)
Genome browser
AA seq
1432 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPSEVTSLVDSCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYGWMHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGSQFREELQRHHLPSYMVKDINARLERIEPQQRSTDSHHHVVNEIKASNV
NPKKSSPRAKISTRENSLFAGDADITEKPIEPVTVYSEKELIREFEKVASTLVPEKDWSL
RISAMRRVEGLVAGGATDYSCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCLLSKELL
GDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIAESAKHDRNAV
LRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRMFAKTWP
DRSRRLFSSFDPVIQRLINEEEGGIHRRHASPSVRERHSQPSFSQTSAPSNLPGYGTSAI
VAMDRSSNLSSGVSLSSGLLLPQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLHVSD
RQDPAALRSSSLDLGVDPPSSRDPPFHASSAASNTLKNSTTAESMPSINRGSNRSGGLGL
SDIITQIQAAKDSGRQSHRGNLLSESHPSFSSLTAKRVSERNERSCFEDNNDSGEARRFM
VGHLDRQQIDYSYRDLNASHVPNFQRPLLRKNAGGRMSAGRRSFDDSQLQVGYMSNHVDG
PVSLNEALNDGLNSSSDWSARVAAFNFLQTLLQQGPKGAQEIIQNFEKVMKLFLRHLDDP
HHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSSTLEIVSKTY
SVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLWLAKLTPLT
RDKNTKLKEASITCIISVYNHYDSTGLLNYILSLSVEEQNSLRRALKQYTPRIEVELLNY
MQSKKEKQRIKSYDPSDAIGTSSEEGYPGASKKNIFLGRYSGGSVDSDSGRKWSSSQETT
TVTGCVVGQSVSSGTQEKLYYNFRSGISSASDLLNQKDSDYTFTPAGENLISRTSPNGSS
YNVENLDGLSPQHLEKNGLNMTNADSLEERHGDEVSGDLDLSHYMLSSIKVNPTPESGPS
IPQILHMINGSDGSLSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVVEDEDFSV
REVALLLISEMLKSQKDAMEDSVEIVIEKLLHVSKDSIPKVSGEAEQCLTTVLSQYDPFR
CLSVIVPLLVTEDEKTLVASINCLTKLVGRLSQEELMSQLSSFLPAVFEAFGNQSADVRK
TVVFCLVDIYIMLGKAFLPHLESLNSTQVRLVTIYANRISQARTGAPIDSNT
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctggaaatggcgcgagccaaggacaccaaggagcgcatggcggcggtg
gagcggctgcaccaactcctcgaagcttctagaaagagcttgagtccatcggaagtgacg
tccctggttgattcttgcctggatctcctcaaggacagcaatttcagagtctcccagggc
gcgctccaggctcttgcttccgccgccgtgctcgccggcgagcatctgaagcttcacttg
aacgcgctcgtgcctgccgtcgtggagcggcttggcgacagcaagcaaccggttagggat
gcggcgaggcgtttgttgacaactctcatggaggtttcgtctccgacgattatagtggaa
agagcaggttcgtatggttggatgcataagagttggagagtgagggaagagtttgcacgt
actgtcacgtctgccattggtctctttgcatccaccgaactccctcttcagcgtgttatt
cttgctccgatacttcagatgttaaatgatccgaatcaagctgttagggaagctgcaatt
ctgtgcattgaggagatgtacatgcaaggtgggtctcagtttcgcgaggagctccagcgc
caccatcttccatcatatatggtaaaggatattaatgctagactggaacgtattgagcca
caacagcgttctacagatagccatcaccatgttgttaatgagattaaggcatcaaatgtc
aatcccaagaaaagcagtccgagagcaaagatttccactagggagaactctttatttgca
ggagatgccgacatcaccgaaaaacccatcgagccagtcacagtgtactcagagaaggag
ctgatacgagaatttgagaaagttgcttcaacacttgtcccggagaaagactggtcattg
cgtatttcagctatgcggagggttgaaggactcgttgcaggaggtgcgactgactactct
tgttttcgaggtcttctgaagcaacttgttggtcccttaagtacacaattatctgaccgg
cggtctaccattgttaagcaggcttgccatctcttgtgtctcttatcgaaagagctactg
ggtgattttgaagcatgcgctgagatttttataccagtacttttcaagctggttgtgata
actgtgcttgtaattgcagaatctgctgataactgcataaaaacgatgctgcgtaactgc
aaagttgcccgtgtacttcctcgcatagcggagtcagcaaagcatgaccgtaatgcagtt
ctgcgagcaaggtgttgtgaatatgcactattaacactcgaacattggcctgatgctcca
gaaattcagcggtcagttgatttatacgaggatctgattagatgctgtgttgcagatgct
atgagtgaggtacgggcaactgctagaatgtgctacagaatgtttgcaaaaacttggccg
gatcgttctcgtcgtttattttcctcctttgaccctgtcattcaaaggctaataaatgaa
gaagaaggtggaattcataggagacacgcctcaccatctgtccgtgagagacactcccag
ccttcattttctcagacgtctgctccatctaatttacctggctatggaacatcagccata
gtcgctatggatagaagttcaaatttgtcctcaggagtatctctttcttctggcctactc
ctaccccagtcaaaggatctcaataaaggttctgaacgtagtctggaaagtgtgttacag
tcaagcaagcaaaaggtcagtgcaattgaaagtatgctccgaggactgcatgtatccgat
agacaagatcctgcagcccttcgttcgagtagtttggatctaggagttgaccctccatcg
tcccgtgatcctccattccatgcctctagtgcagcatccaatactctcaaaaatagcaca
actgctgaatcaatgcctagtattaacagaggcagtaatcgcagtggtggccttggtttg
tcagatatcatcacccaaatacaagcggcgaaggactcaggaagacaatcacaccgtggc
aatctgttgtccgagtctcatccgagcttttcatccttgacagctaaacgggtctcagag
agaaatgaaagaagttgttttgaggacaacaacgattccggggaggcgaggcggtttatg
gtgggtcatttagacagacagcagattgattactcttatagagatttgaacgctagccat
gttcccaatttccagaggccacttttgagaaagaatgctgggggaagaatgtcggcaggc
aggaggagtttcgatgatagccagctgcaagttggttacatgtcaaatcatgttgatggt
ccagtgtctcttaacgaggcccttaacgatggactgaattcaagttctgattggtctgcc
agagttgcagcttttaattttctccaaactttgctgcaacaaggcccaaaaggtgctcaa
gaaataatccaaaattttgagaaagtaatgaaactatttctccggcacttggatgatcct
caccacaaggttgcacaagcagcactgtcgacactcgcggatcttataccatcttgccga
aagccttttgagagctacatggagagagtcttaccccatgttttttcaaggctaatcgat
ccaaaagaggtagttagacaaccttgctcgtcaaccttggaaattgtcagcaaaacctac
agtgtagattcccttttacctgcgttgcttcgttcactggatgagcagagatctccaaag
gctaagttagctgtgattgaatttgccatcaactccttcaacaggtacgctggcaatcct
gaaatttcgggtaacagtggcatcctaaagttgtggctggcaaagttgacaccattaacc
cgcgacaaaaacaccaagttaaaagaagcttccattacttgtatcatatctgtctacaac
cactatgattctacaggacttctaaattacattcttagtttgtcggttgaggagcaaaac
tccttgagaagagccctaaaacaatatactccccgcatcgaggtggagctattaaattat
atgcagagtaagaaggagaaacaaagaataaagtcttatgacccatctgatgccattggg
acatcatctgaagaaggatatcccggtgcttccaagaagaatatattccttggcaggtat
tctgggggttctgttgacagtgatagtgggaggaagtggagttcttcccaggagacgaca
acggtcactggttgtgttgttggtcaaagtgtttccagtggaactcaggaaaaactatat
tacaacttcagaagtgggataagttctgccagtgatctgttgaaccaaaaggattctgat
tatacgtttactccagctggtgagaatttgatatcaagaactagccctaatggaagctca
tacaacgttgaaaatttggatggcttatctccacaacatttggagaaaaatggtctgaat
atgacaaacgctgattccttggaagaaagacatggagatgaggtctccggcgacttagat
ttgagtcactacatgctctcatctattaaggttaacccaacaccggaatctggacctagt
attcctcagattctacatatgatcaatgggagtgatggaagcctttcttcaagcaagata
tctggactgcagcaattaattgaagcctctgtagctaacgaggaatcagtttggaccaag
tatttcaatcaaatactgacggttgttcttgaagtggtcgaggacgaagatttttcagtc
agagaagttgctcttttgcttatttctgaaatgctaaagagccagaaagatgccatggaa
gattctgtagagatagtgattgagaagctgcttcatgtctcgaaggactctattccaaaa
gtttccggtgaagctgagcaatgcttgaccacagttttgtcccaatacgatcctttcaga
tgcttaagtgttattgtgccactattggtaacagaagatgagaaaactctcgtcgcttcc
atcaattgtttaactaagcttgtgggtaggctctcgcaagaggagttaatgagtcagttg
tcttcctttttgcctgcggtgtttgaagcatttgggaaccaaagcgcagatgtccgaaag
acagtggtgttctgtctggtggacatatatataatgcttgggaaagcgttcttgcctcat
ttggaaagtctaaacagcacacaggttcggttggtgaccatctacgcaaacagaatctca
caggctagaactggtgcccctatagactcaaacacgtaa
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integrated database retrieval system
