Brassica napus (rape): 106445443
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Entry
106445443 CDS
T04128
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106445443
03036 Chromosome and associated proteins [BR:
bna03036
]
106445443
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106445443
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106445443
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106445443
microRNA pathway
RISC loading complex
106445443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
106445443
NCBI-ProteinID:
XP_013742458
LinkDB
All DBs
Position
C4:complement(51648265..51654249)
Genome browser
AA seq
922 aa
AA seq
DB search
MDASTGNGAELESANGSGVSDALPPPPPIIPPNVEPVRVQTEVAVKKNLRVPMDRTGFGS
KGQKIQLLTNHFGVKVANLQGFFYHYSVALFYDDGRPVEQKGVGRKVLDKVHETYHSDLD
GKQFAYDGEKTLFTFGALPSNKMDFSVVLEEVSSARTTGNASPNGNEEPSDGDRKRLRRP
NRSKSFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLVRQSF
FHNDPSNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPLVDFVIANQGAK
DPFTVDWSKAKRTLKNLRIKVSPSNQEYRITGMSDKPCREQTFEYRPRNAPKNENGESET
IEITVYDYFLRERNLELQYSADLPCVNVGRPKRPTYIPLEHCTLIPLQRYTKALNTFQRS
ALVEKSRQKPQERMNVLSKALKVSNYDAEPLLRSCGISISSNFTQVEGRVLPAPKLKMGR
GDELFPRNGRWNFNNKQFVEPTKIDKWAVANFSARCNVRQLVDDLIRIGGMKGIEIAAPF
DVFEEGHQFRRAPPMIRVEKMFEEIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLTEY
GIVTQCMAPVRQPNDQYLTNCLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVS
HGSPGQSDVPSIAAVVSSRQWPLVSKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELL
VDFYTSSGKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDENWNPKFLLLVAQK
NHHTKFFQPNSPDNVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIHFS
PDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGVTAP
GPVSVAQLPKLKDNVANSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagtaccggtaatggagctgagctcgagtcagcaaatgggagtggggtttcc
gacgcgctgcctcctcctccaccgatcatacctcccaacgtggagcctgtgagggttcaa
accgaagttgcagtgaagaagaacctaagagtacctatggatcgtactggctttggatca
aagggtcagaagattcaacttttgactaatcacttcggagtcaaagttgctaatcttcag
ggattcttctaccactacagcgtggcgctcttctatgatgatgggcgtcctgttgagcag
aaaggggttggaagaaaagtcctagacaaggttcatgagacgtaccactcggatcttgat
ggcaagcagtttgcctacgatggagagaagacgctgttcacttttggagccttgcccagc
aacaaaatggatttctccgtggtccttgaggaagtttcttccgccaggactactggaaac
gcaagtcccaacgggaatgaagagccaagtgacggtgacagaaaaagacttcgtcggcct
aaccgttccaagagcttcagagtcgagatcagttatgctgccaagatacctctacaggct
ctagccaatgccatgcgtgggcaggaatccgagaattcacaggaggcaataagggtcttg
gacatcatccttcgtcagcatgcagcaagacaaggttgcctacttgtgagacagtcattt
tttcacaatgacccgagtaactgtgaacctgttggtggtaacatcttgggatgtagaggg
ttccattcgagtttcaggacaacgcagggtggaatgtcacttaacatggatgtgacaact
acaatgataatcaagcctggtccgcttgttgactttgttattgctaatcaaggtgcaaag
gatccttttactgttgactggtctaaggctaaaagaacacttaagaacctgaggattaaa
gtcagcccttcaaaccaggagtacaggatcactggcatgagtgacaagccttgcagggaa
caaacgtttgaatatagaccaaggaacgcacccaagaatgaaaacggagagtctgaaact
attgagataacagtgtatgactacttcctcagagaacggaacctggagttgcagtattct
gctgacttgccgtgcgtcaatgttgggaggccaaagcgaccaacctatattcctcttgag
cactgcacattgattccccttcagaggtacacaaaggctctgaacactttccaaagatct
gccctggttgagaaatctagacagaagccgcaagagaggatgaatgttctgtcaaaggcg
ctgaaagtgagcaactatgacgctgaacctctcctgcgttcatgtggcatttctatcagc
tccaactttactcaggtggagggtcgtgttctgccagctcccaagctgaaaatgggacgt
ggagatgaactgtttccgagaaatggtcgctggaatttcaacaacaagcaatttgttgag
ccaaccaagattgataaatgggctgtagcaaatttctccgctcgctgtaacgtacgtcaa
cttgttgatgatctaatccgaattggtggaatgaaaggaattgaaattgctgcccccttt
gatgtgtttgaggaaggtcatcagtttcgccgtgcccctcctatgattcgtgtagagaag
atgtttgaagagatccagtctaagctccctggtgctcctcagttccttctgtgtctcctc
cccgaaaggaagaactgcgacatttacgggccatggaagaagaaaaacttaactgaatac
ggcatcgttactcagtgtatggctccggtgaggcaacctaatgatcagtatcttaccaac
tgtcttctgaagatcaacgccaagcttggtggcctcaactccatgttgagtgttgagcga
actccggctttcacagtaatttctaaggttccaaccatcatcctagggatggatgtttca
catggatctcctggacagtctgatgtcccctccattgctgcggtggtgagttcaaggcag
tggcctctagtctcgaaatacagagcatctgttcgcacacagccttcaaaagctgagatg
attgagtcacttgtcaagaagaatggaactgaagatgatggcataatcaaggagttgctt
gtagatttctacaccagctctggtaagagaaagccagagcatatcataatcttcagggat
ggtgttagtgaatctcagttcaaccaggtcctgaacattgagctcgatcagatcattgag
gcctgcaagcttctagatgagaactggaacccaaagttcctcttgttggtggcgcaaaag
aatcaccacaccaagtttttccagccaaactctcctgacaacgttcctccagggacaatc
atcgacaacaaaatctgtcacccaaagaacaatgatttctacctctgtgcgcacgctggg
atgattggaacaacacgtcctacgcattaccacgtcctgtatgatgagattcatttctcg
cctgatgagcttcaagagctcgtccactcgctctcttacgtgtaccaaagaagcacaacc
gccatctctgttgttgcaccgatctgctatgctcacttggcagctgctcagctaggaacg
ttcatgaagtttgaagatcagtctgagacgtcctcgagccatggtggcgtgacagctcca
ggaccggtctctgttgcgcagctccctaaactcaaagacaacgtcgccaactccatgttc
ttctgttag
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