Brassica napus (rape): 106445534
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Entry
106445534 CDS
T04128
Name
(RefSeq) serine/threonine-protein kinase ATG1b isoform X2
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106445534
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106445534
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106445534
03029 Mitochondrial biogenesis [BR:
bna03029
]
106445534
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106445534
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
ULK family [OT]
106445534
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
106445534
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106445534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
Kdo
Pkinase_fungal
YrbL-PhoP_reg
APH
DUF5888
Motif
Other DBs
NCBI-GeneID:
106445534
NCBI-ProteinID:
XP_013742565
LinkDB
All DBs
Position
A4:complement(3657918..3662512)
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AA seq
713 aa
AA seq
DB search
MAQLAAAAGRRIGDYAVGRQIGSGSFSVVWEGRHLVDGSVVAIKEIAMARLSKKLQDSLM
SEIIILRKINHPNIIRFIDMIEAPGKINLVLEYCKGGDLSMFIQRHGKIPDATAKHFMQQ
LAAGLQVLRDNNIIHRDLKPQNLLLSTDDNDAALKIADFGFARSLQPRGLAETLCGSPLY
MAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQVQLFQNIMRSTELHFPVDCRD
LTSDCKDLCQKLLRRNPVERLTFEEFFHHPFLSDRQPYDVPRSRSGSRTIDGFHSSGSSP
SGKMEEVSHDDSLPFFLDDDSSEPEGSPSYTKHTSPMKSSYGFSVETRRERREAAASSPL
KNMELNSRYSRVSHRADTNNFKFESHRLLDINQFKPSSLPDSRSLSTQGRVVDTPDSIDQ
DYVLISGPSVDIPSSSSGSPKLFNYPFKSPSPPVEFVKRSVTSSTAPMPIAGATGRTIGR
FESLESPNSLPGTSHGSLNLVDAFEQPSTHSFTRIRSLQKCAATIAELVREKIESGKQLE
AFSIQLVILAIWNQALHICHTQAASGVEGSLRQDGNRVRRNISQEGSEKILSQIQREFVL
EVERAEDLAKFVESGNTKMPDAMEIIFQAALTLGIRGGVDEVVMGEAENAVNLYTKAVRL
LVFLVVEAQTLILNPPLTLTNSVRYRIRTYIDNLISRLKHLQSHKRTSGPQKP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggcggcggcggcggggaggagaataggggattacgcggtgggaagacaa
atcgggtcgggttcgttttcggtggtgtgggaagggaggcatctggtagatggaagcgtg
gttgcaatcaaggagatagccatggcgaggcttagtaagaagttgcaagatagtctcatg
tcggagattatcatcttgaggaagatcaatcaccccaacatcatccgcttcatcgacatg
atcgaggctccagggaaaataaacttggtgctggagtactgtaaagggggtgatctgtct
atgtttattcagcgtcatggaaaaatccctgatgctactgctaagcacttcatgcagcag
ttagctgctggtttgcaagttcttcgtgacaataatatcattcaccgagatttaaagcct
cagaatcttcttctatccacagatgataatgatgcagctcttaagattgctgattttgga
tttgcaagatcgttgcagcctaggggtctggcagaaactttatgtggttccccattgtat
atggccccagagataatgcagcttcagaagtatgatgcaaaggcagatctctggagtgtt
ggtgctatattatttcaacttgtgaccggcagaaccccttttacaggaaacagccaagtt
cagttgttccagaacattatgagatcaactgaattgcattttccagtagactgtagagat
ttgactagtgactgtaaagatctatgtcagaaattgctgcgccgtaatccagtggaacgt
ttaacgtttgaagagttctttcaccacccttttctttcagacagacaaccatatgatgtg
ccaaggagtagatcaggttcaagaacaatagatggttttcattcatccggaagcagtccc
tcaggaaaaatggaagaagtttctcatgatgactctttgcccttctttttagatgatgat
tctagtgaacctgagggaagcccttcatataccaaacatacatctccgatgaagtcatct
tatggatttagtgtcgagactagacgtgaaagaagggaagcagcagcatctagtcctttg
aaaaacatggaactcaattccagatatagtagagttagtcatagagcagataccaataac
ttcaagttcgaaagccatagattattagatataaaccaattcaaaccatcaagcttgcct
gattccagatcacttagtactcaaggaagagtagtagatacaccagattcaatagatcaa
gattatgttctgatatctggaccatcagtggatataccatcatcttcatctggttctccg
aagctcttcaattacccattcaaatcaccttcccctcctgtggagttcgttaaaagaagt
gtaacaagttcaacggctcctatgccaatagctggtgccactggcaggaccattggtcgg
tttgaaagcttggagagtccaaattctctcccgggtacttcccatgggtctctgaacctt
gtggatgcttttgaacagccatcaactcacagcttcacaagaatccggtctttgcaaaag
tgtgcagcaacgattgcagagttggttcgtgaaaagattgaatcaggtaaacagttagaa
gctttctcaatccaactggtgattcttgctatttggaatcaagcactgcacatctgtcat
actcaggcagcctcaggcgtagaaggaagcctgcgccaagatggtaacagagtaagaaga
aatattagccaagaaggatcagagaaaatattgtctcagatacagagagagtttgtcttg
gaggttgagcgtgctgaagatcttgccaagtttgttgaatctggcaatacaaagatgcct
gatgcaatggagataatattccaagcagctcttactcttggcatacgtggtggagtagat
gaggtggtgatgggagaggcagagaacgcagtaaacctctacacgaaagcggtgcgctta
ctagtcttccttgtagtggaggcgcaaacgctgattctgaatccacctttgacactcaca
aactcagtaaggtatcgaatcagaacatatatagataacctcataagcagattaaaacac
ctacaatcacataaaagaacttcaggtccccagaaaccatga
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