Brassica napus (rape): 106445536
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Entry
106445536 CDS
T04128
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106445536
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106445536
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
106445536
NCBI-ProteinID:
XP_013742568
LinkDB
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Position
A4:3669869..3673081
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AA seq
563 aa
AA seq
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MASFNSFPIPKQMVGSSSSSSSASRPRILVRSSMASTNSMLVFVPPHPLIKHWLSLLRCD
QTPLPFFVRIASRWSFLSSLKEETRFHQRDHPLKACGCASATAENVYVELKDPKENIGVG
LVGERMSSSSSEKANLSRSMLQYNLLGKNLLALEQTFVALESLRMERDIMLQMRKLGAAE
LFNTCLSRSRASSTASCLPDTGTPELVDTTEEQKTFVHSTRKLRKKARRSSLMTGSDDLG
SRTIWEGVDVPRVRKPSKYRKKRERISRNEAEMPQGVKLVADMERIRTKLEEESGKVASM
ICWAEAAGMNEKLLMRNLHFGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVG
VLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPASIIRTMSQIQKARKTLK
TSQGIKYPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMES
PEEAVMRQSARREVHNLIEGLEAREKQVMVLRYGLEDYRPKSLEEIGKLLRVSKEGIRKI
ERRAMAKIRDQPKADNLRYYLNQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcaattcgttcccaattcccaaacagatggttggttcttcttcgtcatct
tcgtctgcttctcgtccacgtatcttggtgcgatcgagtatggcctcaaccaatagcatg
ctggtctttgtacctccgcatcctttgatcaaacattggctctctctcttgagatgcgac
caaactcctctccccttcttcgttagaattgcgtcgaggtggtcgttcctatcctcactc
aaagaggaaaccagatttcaccagagagatcatcctctaaaagcatgtggctgtgcttct
gcaactgctgaaaacgtctatgtagagctcaaagatccaaaggaaaatattggcgtgggt
ttagttggagaacgaatgtcttcttcttcttcagagaaagccaatttatctcgtagcatg
ttgcagtacaatctactagggaagaaccttttagcactagagcaaacttttgtcgccttg
gagtctttaagaatggaaagagatattatgctgcaaatgaggaagttgggggctgctgag
ttattcaacacctgtctatctaggtcccgagcttcgtcaaccgcttcttgcttacctgac
acaggaacacctgagttggtggatactacagaagaacagaaaacctttgtgcattcaaca
aggaaactgagaaagaaagcaagacggtcgagtttgatgactgggagtgatgatctgggt
tcaagaaccatatgggagggtgttgatgtccctagagtgagaaaaccatcaaaatataga
aagaaaagagagaggatatctagaaacgaggctgagatgccacaaggagtcaagttagtg
gcggacatggagaggattagaacgaaactggaagaggaaagtggtaaggtagcgagtatg
atttgttgggctgaagcagcagggatgaacgagaaacttctcatgcgcaatctacatttc
ggttggtactgtcgagatgaactggtgaaaagcacccggtctttggttcttttcctcgca
agaaactatcgtggtctcgggatcgcccacgaagatttgattcaggcagggtatgtggga
gtgttgcaaggagcagagaggtttgatcacacaaggggttacaagttttcgacgtatgtg
cagtattggataagaaaatcgatgtccacgatggtgtcacggcatgcaagaggcgtccac
attcctgcgtcaataatccgaacaatgagtcagatacaaaaggctcgcaagaccttgaaa
acgagccaggggataaagtatccagctgatgaggagatttcgaaactaacagggtactcg
ttaaagaagattagagcagctaaccaatgcctgaaagtggttggttcaatcgacaagaaa
gttggggattgctttaccacaaagttcctggagtttacaccagacacgacgatggagagt
ccagaggaggctgtgatgaggcagagcgcaaggagagaggtacataatctaatagaaggg
ctagaggctagagagaagcaagtgatggttctacgttatggtcttgaagactataggccc
aagtccttggaagagattgggaagctgcttagggttagcaaagaagggatccggaagata
gaacggagagcgatggctaaaatcagagaccaacccaaagctgataacctcagatattat
ttgaaccagtga
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