Brassica napus (rape): 106445697
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Entry
106445697 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI7
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106445697
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106445697
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106445697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
106445697
NCBI-ProteinID:
XP_013742756
LinkDB
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Position
C3:complement(9910505..9915246)
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AA seq
555 aa
AA seq
DB search
MDSGDDMLDMYSGEDDFYSDDYKDSDNDDDDDDDDGEPDYGFVEEDADDSAMIASHRSQK
NYCVLREEDIHRHQVDDIERVSVVLSITEVEASILLRHYHWSVGKVHDEWFADEERVRNT
VGILENPVVPPSDDDTELTCGICFDSYPPENIVSVSCGHPFCTTCWTGYISTTINDGPGC
LMLRCPDPSCLAAVGHDMVDKLASGEDKEKYNRYFLRSYIEDNRKMKWCPAPGCDYAIDF
VAGSGNFDVSCLCSFSFCWNCTEESHRPVDCSTVSKWILKNSAESENMNWILANSKPCPR
CKRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWMDHGERTGGFYACNRYEVAKQEGQYDET
ERRREMAKNSLERYTHYYERWASNQTSRQKAMTDLQQLQTHNLERLSDKQCTPESQLKFI
LEAWLQIIECRRVLKWTYAYGYYLPDHEHAKRVFFEYLQGEAESGLERLHQCVEKDLLQF
LNAEGPSKDFNDFRTKLAGLTSVTKNYFENLMKALENGLADVDSHAACSSKSTSSKSTGC
SSKTRGKGKGSSRTG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggattcgggagatgacatgctcgatatgtattcaggggaggatgatttctatagcgat
gattacaaggatagtgataatgatgatgatgatgatgatgatgatggagaacccgattac
ggctttgttgaggaagacgctgacgactctgccatgatcgcctcccatcgctctcagaaa
aattattgtgttctgagggaagaagatattcacaggcatcaggtagatgatattgaacga
gtttccgtcgtcctctccatcactgaagtcgaagcgagtattctgcttcgtcactatcac
tggagcgttggtaaagttcatgatgaatggtttgcggatgaagagagggtcaggaatact
gttggcatattggagaatcctgttgttccaccatctgatgatgacacagaacttacatgt
gggatctgtttcgattcgtaccctcccgagaatattgtttctgtttcttgcggtcatcca
ttctgcactacatgctggacaggttacatcagcacgaccattaatgacggcccggggtgt
ttgatgctaagatgtcctgacccttcttgtttagctgctgttggtcatgatatggttgac
aaattagcttctggtgaagacaaggagaaatataatcggtactttcttaggtcttatatt
gaagacaacagaaagatgaagtggtgtccggccccggggtgtgattatgcgattgatttt
gttgccgggtctggaaattttgatgtttcctgcttgtgctcgtttagcttttgctggaat
tgcacagaggagtctcaccgacctgtggattgtagcacagtttcaaaatggattttaaag
aacagtgctgaatctgaaaacatgaattggatacttgccaattcaaagccctgtccaaga
tgcaagcggccaattgaaaaaaatcaggggtgtatgcatatgacatgcacaccgccttgt
aaatatgaattctgttggctttgtcttggtgcatggatggatcatggggaaagaactggt
gggttttatgcttgtaaccggtacgaggtggccaagcaagaaggacagtatgatgagact
gaaaggaggagggagatggcaaaaaattcactagagagatacacacattattatgaacgc
tgggcaagcaatcaaacgtcgaggcaaaaggctatgacggacctgcagcaactgcagacg
cataatcttgaaaggcttagtgataaacagtgcacaccagaatctcagctcaaattcatc
ttagaagcttggcttcagatcatcgaatgtaggcgagtcttgaaatggacatatgcatat
ggatactacctacctgatcatgaacatgccaagcgagtgtttttcgagtatttgcaaggg
gaagctgagtcaggtttggagaggctccatcaatgcgtagagaaggacttgcttcaattt
ctcaacgcggaaggcccatcaaaagatttcaatgatttccggacaaaactagctggtttg
accagcgtaacgaaaaattactttgagaatctgatgaaagctctagagaacggtcttgct
gatgtagattcacacgcggcttgcagcagcaaatcaacaagctctaaatcaacaggttgc
agtagcaaaacaagaggtaaaggcaaaggaagttccagaactggttga
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