Brassica napus (rape): 106446135
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Entry
106446135 CDS
T04128
Name
(RefSeq) transcriptional elongation regulator MINIYO-like
KO
K20826
RNA polymerase II-associated protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106446135
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106446135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
CEP15-like
Motif
Other DBs
NCBI-GeneID:
106446135
NCBI-ProteinID:
XP_013743275
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All DBs
Position
A4:complement(10059461..10064446)
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AA seq
1323 aa
AA seq
DB search
MTEKEQSSGRVNPIAPLSSLVGSIVEKGFPENKPMPPKPSRLPFPVARHRSHGPHVGSRP
QPKVPIVKEEEGDDEEGLINAENYARLQTMSHEEIVKAQAELFEKMDPALVTILKKRGQD
KLKKRKHSVPEVSEECPSDIHSPQGGQQAAVTPSPSSQVTAIPKEASVASQGFFWDTWTE
RVEAVRDLRFSFDGCVLENVVVPPPETGVNMSAVERDFLRTEGDPGAAGYTIKEAIALSR
SVIPGQRCLALNLLASLLNKALSKLCQSGIGQQKVQSTDWEAIWAYALGPEPGLVLALRM
ALDDNHASVVLACAKVIQCLLSCSLNENFFDLLENMGPCGKDMFTAPVFRGKPEIDLGLL
PGCYWKYSAKPSNIVPFREEIMDDGTEDTDTIQKDVFVAGQDVAAGLVRMDILPRIYHLL
ETEPTAPLEECLISVTIAIARHSPKCTTAILKYPKFVQTIVKRFKLNKRMDVLPSQIYSV
RLLKVLARYEKRTCMEFVKNGTFNEVTWHLFQFTSSLDSWVKLGKHKCKLSSDLMVEQLR
FLRVCIQSGCCISQYPELFPALCLWLSCPSFEKLKEKNLICEFASVSTEAYLVLEAFAGT
LPSLYSPRNESDAWDWRYVSPMIDTALSWIMLAPELLEWETGTESVSTSTASLLWLYSGV
IHTFSKVLDKISSHGEEEPLPWLPEFVPKIGLTIIKHKLLSFTVEKDPSRCSSFMEFLCL
LRENCQDEELALASVSCLHGLTRTVVSIQTLIESARSKMETPQGSESIRDGSVLAKGILT
ESLGDLTSVWSSFRDYVASEWPVMQSIEIHKRGGLAPGVGLGWGASGGGFWSTRVLLTQA
DAGLLSLFLHISQLDSQGSVFLMDKMNSALAMCLIAGPRDHLLVEKAFDYVLGPHALEHL
ACCINSNKRTIKSEWKCSEGDYDRMSNVLTSHFKRRWFHPKRKSEPENGSKKVAVGLETI
HEEGEMPTEDQRSDSLIIEWAHQRLPLPPQWFLSSISAVHAGKTSAEDQEPTELLEVAKA
GVFFIAGLESASGLGTVPSPVSSVPLVWKFHALSTVLLAGMDIIEDKNTRSLYSYLQELY
GHVLDEKRQSSGRETELLLRFKSDVFESYSTFLEMLVEQYAAVSYGDVLYGRQMSIYLHQ
CVEPSVRLSAWTALSNARVLELLPSLDKCLGDAQGYLEPAEENEGVLEAYLKSWTCGALD
RAATRGSVAFTLVLHQFSSLLFCNEDNKDNKEEEGSLRSKIVRTLVRDLSRKQHRQGMMV
DLLGYNSKGCADAMEVEEEEESQKREGERRMEVLKEACQGNSSLLSELEKLKECVRVKSK
GRN
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaggagcaaagtagcggacgagttaaccccatagcgccactttcgagcctc
gtcgggagcatcgttgagaaaggttttccggagaacaagccgatgcctcccaaaccctcc
cgtcttccctttccggtggctcgtcatcgttctcacggaccccatgtggggagcagaccc
caacctaaagtccctattgtcaaggaagaagaaggcgacgacgaagaaggtttaataaat
gcagagaactacgcacggttgcagacaatgtcacacgaagagattgtaaaggcacaggct
gagttatttgagaagatggatcctgctttagttaccattctcaagaaacgaggccaggac
aaactcaagaagcgaaagcattctgttcctgaggtttccgaggagtgtccttctgatatt
cactcaccacaaggtggtcagcaggctgctgttactccatccccctcctctcaagtgaca
gcaataccaaaagaagcaagtgtagcttcccaaggcttcttctgggatacatggaccgag
agggttgaggctgttagggacttgagattttcttttgacgggtgtgtcttagaaaatgtt
gttgtcccaccacctgaaactggtgtaaatatgtctgccgttgaacgtgacttcttgaga
actgagggggaccctggtgcagcaggctacaccatcaaagaagctattgcactttcccga
agtgtgattccggggcaaagatgccttgctttgaatctgcttgcgtctctactcaacaaa
gctttgtccaaactttgtcaaagcggaatcggccagcaaaaggttcaatccactgattgg
gaagccatctgggcttatgccctcggaccagaacctggccttgtcttagcattgaggatg
gctcttgatgacaaccatgcctctgttgttctagcatgtgcaaaggtgattcagtgtcta
ctcagctgttctcttaatgagaacttctttgatcttttggagaacatgggaccatgcgga
aaggacatgttcacggctcctgtgttcaggggtaagccggagattgatcttggcctcctc
cctggttgctactggaagtacagcgccaagccctccaatattgttcctttccgtgaagaa
atcatggatgacgggactgaagatacagacactatccagaaagatgtttttgtagccgga
caagatgttgcagctggtcttgtcagaatggatatccttccaagaatttaccaccttctc
gagacagaacctacagcgccgctcgaagaatgcctaatttctgttactattgcgatagcg
agacattctccaaaatgcacaactgctatcttgaagtatccgaaatttgtgcaaacaatt
gtgaaaagattcaagttgaacaagagaatggacgttcttccttctcagatctattctgtg
cgcctcttaaaggtcttggcccggtatgagaaaaggacatgcatggagtttgtgaagaat
gggacattcaatgaagtcacttggcatttgtttcagttcacctcctctcttgattcatgg
gtgaagttagggaagcacaagtgcaagctttcatctgatttgatggttgaacaactacgg
tttttgagggtctgtatccaaagtggctgttgcatatctcagtacccagagctattccca
gccttatgcttgtggttgagctgcccatcatttgaaaagctcaaggagaagaatctaatc
tgcgagtttgcttctgtgtcaacggaagcttacctggtccttgaggctttcgccggaaca
cttcctagcttgtactcaccccggaatgaatctgatgcttgggactggagatatgttagt
cctatgattgatacagcactgagctggataatgttggcccctgaattactcgaatgggag
acaggaactgaaagtgtatctacgtccactgcttctctgttgtggttgtattcgggtgtc
attcatacattttccaaagttcttgataaaatatcttcccacggggaggaagagcctctg
ccatggctgccggagtttgttccaaagattggtctcaccatcatcaagcacaagcttctt
agttttaccgttgaaaaagacccttccaggtgctcctcgtttatggaatttttgtgtttg
ctaagagaaaattgtcaagatgaggaactagctttagcttctgtaagttgtctccatggg
ttgacgcggaccgttgtgtctatccaaactctgatagagtcagctagatccaagatggaa
actcctcaaggaagcgagtccattagagatggctccgtgcttgcgaaaggaatactcaca
gagtctctcggtgacttaacatcggtgtggagctcttttagagattacgttgcatcggaa
tggcccgtcatgcaatccattgagatacataaacgaggcgggctagctcctggggtggga
cttggttggggagctagcggcggtgggttttggtcaacgagagttctgttgacacaagct
gacgcgggtcttctgagtctctttcttcatatctctcaactggactcgcagggatctgtt
ttcttgatggataaaatgaactccgctttagctatgtgcttgatcgcaggtccaagggat
catttacttgtggagaaggcctttgactatgtccttggaccgcatgcgttagagcacttg
gcctgctgtatcaactcaaacaagagaaccataaagtctgagtggaaatgcagtgaaggg
gattatgatcgtatgagcaatgttctaacttctcacttcaaacgtagatggtttcatcca
aagagaaaatctgaacccgagaatggctccaagaaagttgcagttggtctggagactata
catgaggaaggtgaaatgccaactgaggaccaaagatcagactcccttatcatagagtgg
gctcaccagagactgccactgcctccacagtggttccttagctccatctcagcagtccac
gctggtaaaacctcagcagaggatcaagaaccaacagagttgcttgaagttgcaaaagca
ggagttttctttattgcaggacttgagtcagcctctgggctgggaacggttccgtctcct
gtttcgagtgtaccgttggtttggaagtttcacgctttgtccaccgtgttgcttgctgga
atggacatcatagaagacaagaacactaggagcttgtacagttatctccaggagctctat
ggacatgttctagacgaaaagagacaaagtagcggccgtgaaactgagctcctcctgagg
ttcaagtctgacgtattcgagagttactctacgtttctggagatgctggttgagcaatat
gctgcagtgtcgtatggggacgtactgtatgggcgacagatgtcgatttacttgcatcaa
tgtgtggaaccttctgttcggctttcagcatggaccgcactctccaatgcccgtgttctt
gagctattgccgagtctagacaaatgcttgggagatgcacaaggatacctcgaaccggct
gaggaaaacgagggagtccttgaggcttacttgaagtcatggacttgtggagcactggat
agagctgcgacccgaggatcagtagcctttacgctagttctgcatcagttttcatctcta
ttgttctgcaacgaggacaacaaggataataaagaagaagaaggatccctgcggagtaag
attgtaaggactctggtgagagatttatcaagaaagcagcatcggcaggggatgatggtg
gatctcctggggtataatagtaaagggtgtgcagatgcgatggaagtggaagaagaagaa
gaatcacagaagagggagggagagagaagaatggaggtgttgaaggaggcttgccaaggc
aactcgtcgctcctctcggaactggagaagctgaaggagtgtgttagagtcaagagtaag
ggaagaaactga
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