KEGG   Brassica napus (rape): 106446166
Entry
106446166         CDS       T04128                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like 2 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106446166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106446166
   03041 Spliceosome [BR:bna03041]
    106446166
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106446166
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106446166
Spliceosome [BR:bna03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106446166
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 SF3a60_bindingd RRM_Nup35
Other DBs
NCBI-GeneID: 106446166
NCBI-ProteinID: XP_013743310
LinkDB
Position
A4:10315564..10317771
AA seq 422 aa
MDPYATETVVDEENHEVKPSEDVEDDDDKSQPQSGGGIDSAGKIFVGGLARETTSAEFVK
HFEKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKLIQDNHIINGKQVEIKRTIPRG
SMSSSNEIKTKKIFVGGIPSTVDDDEFKEFFMQFGELKEHQIMRDHATGRSRGFGFVTYE
SEEMVDLLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSRRFGDSRSNFGGGYGDGYGGG
PGGGYGGPDGPYKSGGGYGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGGEPPLGYSGR
YGGGGGGGYNRGGYSMGGGGGGGYGGGPGDMYGGPYGEPAGGYGGPSGSYGSGYGSGGYG
GGGYRGSSGGYEMGGTGVGGGGGYPGGGGGAGGGGSFYGGGGGGGSRGGYGGGSGRYHPY
GR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggacccttatgcaacggagacagtcgtggatgaggagaaccacgaagtgaaaccatcc
gaagatgttgaggacgatgacgacaaatctcagcctcaatctggtggtggcatcgatagc
gcaggaaagatatttgttggaggtttagccagggagacaacttcagctgagttcgtcaag
cattttgagaagtatggggagattacagattctgtgattatgaaggataggaaaactgga
cagcctcgagggtttgggtttgttacttatgctgattcctctgtggtcgacaaacttatt
caggacaatcacattatcaacgggaagcaggttgagattaagcggacgataccgagagga
tccatgagctcctccaacgagatcaaaaccaagaagatatttgttggcggaatcccttca
actgttgatgatgatgagttcaaggagttctttatgcaatttggagagctcaaggaacac
cagattatgcgtgatcacgcaactggaagatcacgtgggtttgggtttgttacatatgaa
agtgaagagatggttgatcttctcttggcaaaagggaacagaattgagctctctgggact
caggttgagataaagaaggcagagccaaagaaaccaaactccgtaacaaccccttcaagg
cggtttggtgactcacgctctaacttcggcggaggttatggagacggttatggtggagga
cccggcggtggatatggtggtccagatggtccttacaaatctggtggcggctatggaggt
ggccggtctggtggctatggagggtacggaggagagtttggcgggtatggcggcggtgga
tatggtggtggtgttggaccttatagaggaggagagcctccacttgggtactctggtcgt
tatggaggaggaggcggtggtggttacaacagaggtggttacagcatgggaggtggagga
ggaggaggttacggtggtggacctggagatatgtatggtgggccgtacggtgagccagca
ggtggttatggtggaccaagtgggagttatggaagtggatacggtagtggtgggtatggt
ggaggaggctatagaggcagcagtggtgggtatgagatgggtggtactggagttggaggc
ggaggaggctaccctggtggtggcggcggagcaggcggaggaggctcgttctatggtggt
ggaggaggaggaggaagtagaggaggatatggaggaggttcgggacggtaccatccttac
ggaaggtag

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