Brassica napus (rape): 106446239
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Entry
106446239 CDS
T04128
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106446239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106446239
Spliceosome [BR:
bna03041
]
Complex C
Other components
Step II factors
106446239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
BLOC1S3
Tudor_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
106446239
NCBI-ProteinID:
XP_048602120
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Position
C1:complement(36465447..36474620)
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AA seq
541 aa
AA seq
DB search
MATASVGFKSREEHRKQQELEEARKAGLAPAEMDEDGKEINPHIPQYMSSAPWYLNADKP
SLKHQRKWKVDPNYTKSWYDRGAKTFQADKYRKGACENCGAMTHKTKLCTERPRKIGAKW
TNKNIAPDENIETFDLDYDGKRDRWNGYDTAKYAEVIKRYEARDEARRNFLKEQQLKKLE
KKRNKKVDEEESSDADEEEEEDALKHDEAKADESKQMDFSKVEKRVRTTGGGSTGTVRNL
RIREDTAKYLLNLDVNSACYDPKTRSMREDPLPNADPNEKFYAGDNQYRMSREALEFKNL
NIHALQLSEKGQEEVIMQAAPSQAELLFKKYKEAKEKLKKQIQETIMEKYGNAAASVEEI
PKELLFGQSEREVEYDRCGRVIKGMELSVPKSKYEEDVYINNHTSVWGSWWKDQQWGYKC
CQQTIKNSYCTGVAGIEAAEEAADLMRTNIERHAAASNDRSGPVEEKRFVTWGSDTPEDL
VLDREKLAEALKKEDERKKEEKDERKRKYNVQWNDQITPEEMEAYRMKRIHEDDPMKNLL
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgggtttaagtctagagaagagcaccgtaagcagcaagaattg
gaagaagcgcgtaaagcagggctagctccggcagagatggatgaggacggaaaagagatt
aaccctcacattcctcaatacatgtcttctgctccttggtacctcaatgcagacaagcct
agcttaaaacatcaaaggaaatggaaagttgatccaaactatacaaagtcgtggtacgat
agaggagccaaaacgttccaggcagataagtacaggaaaggagcttgtgagaactgtggg
gctatgacgcataagacaaagttgtgcacagagaggccaagaaagataggagcaaagtgg
acaaataagaacatagctcctgatgaaaatattgagacattcgaccttgattacgacggg
aaaagggatagatggaacggttatgataccgctaaatatgcggaggtgatcaagaggtat
gaggctagagatgaagcaagaagaaacttcttaaaagagcagcagttaaagaagctggaa
aagaaacgtaacaagaaggttgatgaagaagagtctagtgatgctgatgaagaagaagaa
gaagatgctctgaaacatgatgaagccaaagctgatgagagcaagcaaatggatttttct
aaggtggagaaacgtgttcgtactactggtggcggcagcacaggcactgttaggaacttg
cgtatacgtgaagacactgcaaaatatcttttgaatcttgatgtcaattctgcttgttat
gatcccaagacaaggtctatgcgtgaagatccccttccaaacgctgatccaaacgagaag
ttctatgcgggagacaatcaatacagaatgagtagagaagctctagaattcaagaacctt
aatattcacgcgttgcaattatctgagaaaggccaggaagaggtcatcatgcaagctgct
ccttctcaagccgagctgcttttcaagaaatacaaagaggcgaaagagaaactaaagaaa
cagatccaagaaacaatcatggagaagtatggaaatgctgctgcatctgtggaagagatc
cctaaggagcttttatttggacaaagcgagagagaagttgaatatgaccgatgtggaaga
gttattaaaggaatggaattgtcggtacccaagagcaaatatgaagaagatgtttacata
aacaaccacacaagtgtgtgggggtcgtggtggaaggatcagcagtggggttacaaatgt
tgtcagcaaacaatcaaaaacagctattgcactggtgttgcgggaatagaggcggctgag
gaagctgcagatctaatgagaaccaatatcgaaagacatgctgcagcttctaatgatagg
tcaggtccagtagaggagaaaagatttgtgacttggggaagtgatacaccagaagatctt
gtccttgaccgagaaaaacttgcggaagctttaaagaaggaggatgagaggaagaaagag
gagaaagatgaaaggaaacgtaaatacaatgtccaatggaatgaccagattacacctgag
gagatggaagcttaccgaatgaaaagaatacacgaggatgatcccatgaagaatcttctg
cactag
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