Brassica napus (rape): 106446356
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Entry
106446356 CDS
T04128
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106446356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106446356
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106446356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
106446356
NCBI-ProteinID:
XP_013743514
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Position
A4:11870168..11872596
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AA seq
321 aa
AA seq
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MFFDGYHYPGTTFEHSYRCYPASFIDKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR
NAGSERVSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTT
DFLDISNPKAILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANGISIIETDCEVD
FAPPLDYKEPERPKAPTAAAKALAKAEEVVPEPEPKFNPFTGSGRRLDGRPLSYEPPSSS
SSAKDKQPAVASGNGQSSVASGSERAARQAQGKLVFGANANRAPKEAPKVGAGKETKKEE
EEKKEESKFQAFTGKKYSLRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgatggataccattatcccggaaccacctttgagcatagttaccgctgctac
cctgcttctttcatcgacaagcctcaaattgaaagtggtgacaagattataatgccccca
tcagcccttgatcgtctcgcatctttgcatattgactatcctatgctgtttgagcttcgt
aatgctggaagtgaacgtgtttcacactgtggcgtccttgagttcattgctgaagaaggc
atgatttacatgccttactggatgatgcagaatctgctgctgcaagaaggggacattgtg
agagttagaaatgtcactcttcctaaggggacttatgttaaactacagccccacactact
gacttccttgatatatccaaccctaaagccatcttggagacagctttgagaaactactca
tgcctaaccactggggatagcattatggttccatacaacaataagaagtacttcatagat
attgttgaaacaaagcctgctaatggtatcagcatcattgaaactgactgtgaggttgat
tttgcacctccccttgattacaaagagcctgaacgtcctaaagcacctactgctgcagct
aaggctctggcaaaagctgaggaagttgtgcctgaacctgaaccaaagtttaatcctttc
acgggatctggaagacggttagatgggagacctctttcctatgagccaccttcttcctcc
tctagcgcaaaagacaaacagcctgctgttgctagtggtaatggacagtcgtctgtagca
agtggctcagagagagctgcgcgacaagctcaaggaaagcttgtgtttggggccaacgca
aaccgtgctccaaaagaagctccaaaagttggagctggaaaggagacaaagaaagaggaa
gaagagaagaaagaagagtccaagttccaagctttcactgggaagaagtattcattgagg
ggttga
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