Brassica napus (rape): 106446383
Help
Entry
106446383 CDS
T04128
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106446383
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106446383
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106446383
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
106446383
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106446383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
106446383
NCBI-ProteinID:
XP_013743549
LinkDB
All DBs
Position
A1:6444270..6449993
Genome browser
AA seq
859 aa
AA seq
DB search
MYNSNRVQVYHEDVRVGEMEIHPLKEDDVMKERKKKVMEEVKMGIKISGFSQPSKRCTPL
AVLTTISSSGLCFKLEASPTPAAHDPLSVFHSSCLRDQKTAVMSLGGEELHLVAMCSEDI
NNDRPCFWAFTVAPGTYDSCLGMLNLRCLGIVFDLDETLVVANTLHTFEVKMEGLLRRMS
SEVDPRRRAVMVAQMKRYQDDKNLLKQYVESDQVVENGEVIKAQSEIVPALSDNHQPLVR
SLIRLQEKNIVLTRINPMKRDTSVLVRLRTSWEELRSYLTAKEQRKRFEVYVCTMADKEY
ALEMWRLLDPEGNLINANDLLARIVCVKSGFKKSLFNVFLNATCHPKMALVIDDRREVWD
EKDQPRVHVVRAFAPYHSPKAEATATPVLCAAKNLACVVRSGFFKHFDDSLLPRIAEISY
EDDVEDIPSPPDVSHYLVSEDVTSGLNGNKDPLSSDKMADAGVGRILKEAICGSSAALPA
ANTDPRIAAPVQQPIASASYVPAPVPVPVPVPVPVPVPVPVPVPAPVPVMQQAPQPSAIA
FPSIQFQQPAIVATHLVPSEPSLQNSPASVEGEVPESELDLDTRRRLLILKHGQDPRDAA
PSEPSFPKRPPVQAPPPHVQPRHGWFAAEEEMDPKTENPVGLLHEIAIKCGTKVDYKPGL
VASTNMRFSIEAWFCGKKIGVGIGKSRREALQKAAEFSIQNLADIYLSRENGDAGPSHRD
AGPLTNQPSAGDETAMPVATYTRLEGSIRHNGSIPTLRELCASEGWELSFQSQRPLHSDM
VHTEEFHAKVAINGRVLGEGVGSTWEKARMNAAERALGNVGPLLQRQVSSRSFGGKSNKR
LKPNFQRSMQRMASSGRSS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtataacagtaatagagtgcaagtgtaccatgaagatgtgagggttggggagatggag
atacaccctctaaaggaagacgatgtgatgaaggagaggaagaagaaagtcatggaggaa
gtgaagatgggaatcaaaattagcggtttttctcaaccaagcaagagatgcactcctctt
gcagtgcttactaccatttcatcttctggactttgtttcaaacttgaagcttcgccaact
cctgctgctcatgaccctctcagtgtcttccactcgtcgtgtcttagggaccagaagact
gcagtaatgtcccttggtggagaagagcttcatttggttgccatgtgctcggaggatatc
aacaatgaccgtccttgtttctgggcgtttacagttgctcctggaacttatgattcctgt
cttggcatgctgaatcttagatgtctggggattgtgtttgatcttgatgaaacactcgta
gtggccaataccctgcacacatttgaggttaaaatggaggggttgctccggagaatgagc
agcgaggtggaccctcgacgccgtgctgttatggtggctcagatgaagcgttatcaggat
gacaaaaatctgttaaagcagtacgttgaaagtgaccaggttgttgaaaacggggaggtg
attaaagcacaatctgaaattgtccctgccttgtctgacaaccatcagcctcttgttcgt
tctctgataaggttgcaagagaagaacattgtcttgactcgcattaatccaatgaaacgt
gatacaagtgttcttgtgaggttgaggacttcatgggaggaacttcgaagctatttgaca
gcaaaagagcagcgcaagcgttttgaagtatatgtttgcacaatggctgacaaagagtac
gcattagagatgtggaggctccttgatccagaagggaatttgataaacgcaaatgacttg
ctggctcgcattgtttgtgtgaaatctggtttcaagaagtcacttttcaatgtgtttctc
aatgccacctgccatccgaagatggcactggtaattgatgatcgacgggaagtttgggac
gagaaggatcaaccgagggtgcatgtggttcgtgcatttgctccctaccattctcctaaa
gctgaagcaactgcaacaccggtactgtgcgctgccaaaaatcttgcttgcgttgtcaga
agtggatttttcaagcatttcgatgatagtctgctaccaaggattgctgaaatatcttat
gaggatgatgttgaagatattccatcacctcctgatgtaagccattacttggtgtctgag
gacgtgacatctggtttaaatggaaacaaagatccactttctagtgacaagatggctgat
gctggagtggggagaatactgaaggaggcaatttgtggatcttcagctgcccttccggcg
gcaaatacagatccaagaatagctgctcccgttcagcaacccattgcttctgcttcttat
gttcccgctccagtaccagtaccagtaccagtaccagtaccagtaccagtaccagtacca
gtaccagtaccagcaccagtcccagtcatgcaacaagcaccgcaaccatcagctatcgcc
tttccaagcattcagtttcaacaaccggcaatagtagctacacacttggttccctcagag
ccaagtttgcaaaattctccggctagtgtggaaggtgaggtacctgaatcagagttagat
ctagataccaggaggaggctcctcatattgaaacatggacaagatcccagagatgctgct
ccaagtgaaccttcatttccaaagagaccgccagttcaagctccacctccacatgtgcag
ccaagacatggttggtttgctgctgaggaggagatggatccaaaaacagagaatcccgtt
ggattactgcatgagattgctattaaatgtggaactaaggtggactacaaaccgggtttg
gttgctagtacaaatatgcggttctctattgaggcttggttttgtggtaaaaaaattgga
gtagggattggcaaatcgagacgagaagccctgcagaaggctgctgaattttcaatccag
aacttagctgatatatatttgtctcgtgaaaatggcgatgcaggaccaagtcacagggat
gcaggcccccttactaatcagccatctgccggagatgaaacagcgatgccagttgctaca
tatacaagattagaaggctctattaggcacaatggctccattcctacgctcagggaactg
tgtgcatcggaaggttgggagctgtcttttcaatctcagcgtccacttcattctgacatg
gtccacactgaagaatttcatgctaaggttgcaataaatggacgtgttttaggggaagga
gttggatcaacatgggagaaagctagaatgaatgctgctgagagagcactgggtaatgtg
ggaccattgcttcaacgacaagtatcttcaagatcgttcggtgggaagtcaaacaagcgt
ctgaagccaaactttcaacggtccatgcaacggatggcatcttcaggaagatcctcttaa
DBGET
integrated database retrieval system
