Brassica napus (rape): 106446441
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Entry
106446441 CDS
T04128
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106446441
Transporters [BR:
bna02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
106446441
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GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_3
Motif
Other DBs
NCBI-GeneID:
106446441
NCBI-ProteinID:
XP_013743625
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Position
A4:12594696..12597698
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AA seq
527 aa
AA seq
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MVTKEDDCLPPPTQPSRCYSPPSTTPLAELETTRSLEIMESSFLSPVWLLVIFCIINLLN
YMDRGAIASNGVNGSTKSCNDKGKCTPATGIQGHYNLSNFEDGVLSSSFMVGLLIASPIF
ASLAKSFNPFRLIGVGLTVWTIAVLGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDD
NAPHKQRAAWLGLFYMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVLMAPFAVLGFLMK
PLQLKGFPSTESVEVMASSLGAEISKNNNHLQAGNEIKHDEVEVSIEIGRSSYANPVWKS
ITQFARDMKVLCKERVFVVNVLGYVAYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTI
ICGIVGTLSGGLILDHVTSTIPNAFKLLSGATFLGATCCFTAFTLKSLYGFVALFAIGEL
LVFATQAPVNYVCLHCVEPSLRPLSMAISTVAIHIFGDVPSSPLVGIVQDHIDSWRKTAL
ILTSVLFLAAAIWFIGMFINIIDRFNIEAENENPRSRQGQSIMVMNP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaagaagatgattgtcttcctcctccgacacagccgtcgagatgttattct
cctccttctacgactcctcttgcagagctagagactactcgaagcttagaaatcatggaa
tcatcctttctctctcccgtttggttgctggtgatcttttgcatcattaacttgttaaac
tacatggatcgaggtgcgatagcaagcaatggtgttaatggaagtaccaagagttgtaat
gataagggcaaatgcacccctgcaactggaattcagggacactataacctaagtaatttt
gaagacggtgtattgtcatcttccttcatggttgggcttcttattgcatccccaatcttt
gcttcattggcaaagagcttcaatccatttagacttattggagtaggtttaactgtttgg
actattgcagttcttggctgtggaagttccttcgcattttggtttatcgtcttatgtcgc
atgtttgttggtgtaggtgaagcttctttcattagtcttgcagctccatttatagatgat
aatgctcctcataaacagagagctgcgtggcttggactgttttacatgtgtataccaagt
ggtgttgctcttggttatgtctatggcggatacgtcggaaaacattttagttggcgctat
gcgttctggggagaagctgttttgatggctccatttgctgttcttggtttcttgatgaaa
ccgttgcagttaaaagggttcccttctactgaatcagttgaagtaatggcttcatcacta
ggtgcagagatatcgaaaaacaacaaccatcttcaagctggtaatgagattaagcatgat
gaagttgaggtctctattgagattggcaggtcaagttacgctaacccagtttggaaatca
ataactcaatttgcgagagacatgaaagtcctatgcaaagaaagggtctttgttgttaat
gtcttaggttatgtggcatacaattttgttattggtgcatattcatactggggaccaaag
gccggttataacatttataaaatgaaaaacgctgatatgatctttggggcagtaactatc
atttgtgggatcgttggaacattatcaggtggcttaatactagatcatgtcacttctaca
attccaaatgctttcaagctcttatccggagcaacatttctcggggcgacatgttgcttt
actgcattcaccttgaagagtttatacggtttcgtagctcttttcgccataggagagctt
cttgtgtttgctacacaggctcctgtgaattatgtgtgtttgcattgtgtggaaccaagt
ttaagaccattatcaatggctatctccactgtagcaattcacatatttggcgatgttcca
tcttcgccacttgttggtatcgttcaggatcatatcgacagttggagaaaaacagcgttg
attcttacatcggttctgttcttagctgctgcaatatggtttatagggatgttcataaac
attatagatcgctttaacatagaagctgaaaatgagaacccgagaagcaggcaaggacaa
tcgattatggtgatgaatccataa
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