Brassica napus (rape): 106446447
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Entry
106446447 CDS
T04128
Name
(RefSeq) malate dehydrogenase 1, peroxisomal-like
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00270
Cysteine and methionine metabolism
bna00620
Pyruvate metabolism
bna00630
Glyoxylate and dicarboxylate metabolism
bna00710
Carbon fixation by Calvin cycle
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bna_M00012
Glyoxylate cycle
bna_M00168
CAM (Crassulacean acid metabolism), dark
bna_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106446447
00620 Pyruvate metabolism
106446447
00630 Glyoxylate and dicarboxylate metabolism
106446447
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
106446447
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
106446447
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
106446447
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
Epimerase
DapB_N
Motif
Other DBs
NCBI-GeneID:
106446447
NCBI-ProteinID:
XP_013743634
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All DBs
Position
A4:complement(12696650..12699906)
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AA seq
353 aa
AA seq
DB search
MDANQRIARISAHLNPPNLDQIGSGSGLEGVGCRAKGGSPGFKVAILGAAGGIGQPLAML
MKMNPLVSLLHLYDVANAPGVTADISHMDTSAIVRGFLGQSQLEEALTGMDLVIIPAGVP
RKPGMTRDDLFKINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP
KKLMGVTMLDVVRANTFVAEVMSLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTQNEI
EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLKGLRGDANIVECAFVASHVT
ELPFFASKVRLGRCGVDEVYGLGPLNEYERMGLEKAKKELEGSIAKGVTFVKK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaccagcgtatcgcgagaatctctgctcatctcaaccctcccaatctcgat
cagattggttccgggtcgggtcttgaaggggtgggttgccgggcgaaaggcgggtctcca
ggattcaaagtggcgatactgggagcagcgggagggatagggcagcctctggcgatgtta
atgaagatgaatccgttggtgtcgcttcttcatctctacgacgttgctaatgctcctggt
gtcaccgccgatattagtcacatggacactagtgccatcgttcgtggatttctcggtcag
tcgcaattagaggaagcacttacgggtatggatctagtgatcataccagctggtgttccg
aggaagccagggatgacgagggatgatcttttcaaaatcaacgctggcattgtgaggaca
ctctctgaagctatagccaagtgctgtcccaaagcgattgtgaatatcatcagtaatcct
gtgaactctaccgtgccaatcgcagctgaggttttcaagaaagctggcacttttgatcca
aagaaactcatgggagtcaccatgcttgatgttgttagagctaatacttttgtggcggaa
gtaatgagtcttgatcctcgagaagttgatgttccagtcgttggaggacacgcaggagtt
acaatcttgcctctgctttctcaggtgaaacctccttgctctttcactcaaaatgagatt
gaatatctcacagaccgtatccaaaatggtggcactgaagttgtcgaggcaaaagctggt
gcaggttctgcaacactatccatggcttacgcagcagtgaagtttgcagatgcttgcctc
aagggtctacgtggcgatgcaaacatcgtcgagtgtgcatttgtggcatctcatgtgact
gagcttcccttcttcgcatcaaaggtgcgtctaggaagatgtggggtcgatgaagtgtac
ggtctcggaccattgaatgaatacgagaggatgggactggagaaggcaaagaaagagctt
gaagggagtattgcgaaaggtgttacctttgtgaagaagtaa
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