Brassica napus (rape): 106446572
Help
Entry
106446572 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106446572
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106446572
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106446572
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106446572
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106446572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106446572
NCBI-ProteinID:
XP_013743799
LinkDB
All DBs
Position
C7:7103447..7106101
Genome browser
AA seq
231 aa
AA seq
DB search
MPDSPRMRDSQSPSPLRELSRSWSRSRSRSGSRPRSSSVPRHRSRSRSRGRSRSRERGHR
RTETANPGSTLYVTGLSTRVTEREIETHFSKEGKVASCFLVVEPRTRASRGFAFVTMDSY
EDADRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNDRDHGGRDRDRGSHYGR
DDYGDRRSARRPPLRGRRDYSPPPRRERSRRDRSYSPYGSPERRRHHRGSR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgccggattctccgagaatgagagattcacaatctccttcacccctgagagaactgtcc
aggtcttggtccagatcaagatcaagatctgggtccagacctaggtcgagttctgtccca
aggcatagatcaagatcaagaagccgcggaaggtcgaggtcgagggagaggggccatcga
aggactgaaactgcaaaccctgggagtactctttacgtgacgggcttatctacaagggtc
acagagagggagattgaaacccatttctccaaggaggggaaggttgcctcctgctttctt
gtggtggagccccggactcgtgcttctcgtggttttgcctttgttacaatggatagctac
gaagatgctgaccgctgcattaagtacctgaaccagtctgttctggagggccgttacatt
actgttgaaaggtcaaggaggaagcgtccaagaactcccactccagggcactatcttggt
ctgaaaaacgacagggatcatgggggtcgtgaccgagaccgtggtagtcactatgggcgt
gatgattatggagaccgtaggtcagcaagacgaccacctttgagaggaaggcgtgactat
tctccgccacctcgcagggaaaggtcgaggagagataggtcttactctccttatgggagt
ccagaaaggaggagacaccaccgtggctcaaggtga
DBGET
integrated database retrieval system
