Brassica napus (rape): 106446727
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Entry
106446727 CDS
T04128
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106446727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106446727
03110 Chaperones and folding catalysts [BR:
bna03110
]
106446727
03029 Mitochondrial biogenesis [BR:
bna03029
]
106446727
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106446727
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106446727
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106446727
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106446727
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106446727
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106446727
Exosomal proteins of other body fluids (saliva and urine)
106446727
Exosomal proteins of breast cancer cells
106446727
Exosomal proteins of colorectal cancer cells
106446727
Exosomal proteins of bladder cancer cells
106446727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
106446727
NCBI-ProteinID:
XP_013743955
LinkDB
All DBs
Position
A4:15076431..15079087
Genome browser
AA seq
585 aa
AA seq
DB search
MASANALSSASVLCSSRQRKLSGGTQQKGERVSYKKANRRFSVRANVKEISFDQSSRAAL
QAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARP
VKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLLVEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTGE
ALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIEQL
GIARKVTISKDSTTLIADAASKDELQARISQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDAD
ERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPQGLMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcaaacgctctctcctccgcctccgtcctctgctcttcacgccagagaaag
ctcagtggtggaactcagcagaaaggtgaaagagtaagctacaaaaaagcaaatagacgt
ttcagcgttagagcaaatgtaaaagagatctctttcgaccagagctcaagagctgctctt
caagctggtattgacaagcttgctgatgccgttggcctcactcttggccctagagggaga
aatgtcgtgttggatgagtttggaagtcccaaggtcgtgaatgatggagtcaccattgct
agggccattgagttacctgacgctatggagaatgctggtgcagctctcatccgtgaggtt
gctagtaagactaacgactcagctggtgacggcacaaccactgcctccgtcctcgctcgt
gagataatcaaacacggcttactaagcgtcacttccggtgccaatccagtctccctcaag
agaggaatcgataagactgttcaagctttgatcgaagagctcgagaagagagctagacct
gtcaaaggcggtagtgacatcaaagccgtggctacaatctctgctggaaatgatgagctt
gtgggaacaatgattgctgatgccattgataaagttggacctgatggtgttttgtccatt
gaatcttcttcctcctttgagactaccgtcgaagtcgaagaaggaatggagattgataga
ggttacatctcaccacagtttgttacaaaccctgagaagctcctagtcgagttcgagaac
gctagggtgctgatcaccgatcagaagatcactgccatcaaagacatcatccctatctta
gagaaaaccactcagcttcgagctccgttgctcatcatcgcggaggatgtcaccggcgag
gccctagcgaccctcgtcgtgaacaaactccgcggcgtgctcaacgtggtggcagtcaaa
gctccagggtttggtgaaagaaggaaagctatgcttcaggacattgccatcttgacgggg
gccgagtaccaggccctcgacatgggtcttctggtggagaacacgaccatagaacagttg
gggatcgctagaaaagtcactattagtaaagactcgaccacgcttatagctgatgcagct
tccaaggacgagttgcaagcgcgtatctcccagctgaagaaggaactctccgagaccgac
tctgtgtatgactctgagaagctcgctgagagaatcgccaagctctctggtggtgttgct
gttattaaagtcggagcagcgactgagactgagctcgaggaccgtaagcttcgtattgag
gacgcgaagaacgctacatttgctgctatcgaagaagggatagttcctggcggcggcgcc
acgctggtgcatctctcaactgtgattcctgctattaaggagaagctggaggatgctgat
gagcgtttgggagctgacatagtacagaaggctttggtggcaccagctgcgcttattgct
cagaacgctggaatagaaggagaagttgttgtggagaagattatgttcagtgagtgggag
atagggtacaatgccatgactgatacatatgagaatctgttggaagctggagtgattgat
ccagctaaagtgacgagatgtgcgcttcagaacgctgcttcggttgcggggatggtgctg
acaactcaggctattgttgttgacaaaccgaaacctaaggctcctgctgctgctgctcct
caaggtctcatggtgtaa
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