Brassica napus (rape): 106446735
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Entry
106446735 CDS
T04128
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106446735
Membrane trafficking [BR:
bna04131
]
Protein recycling
Others
EARP complex
106446735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
106446735
NCBI-ProteinID:
XP_013743968
LinkDB
All DBs
AA seq
933 aa
AA seq
DB search
MNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHTHSKKKQALLDMLPILTDLRH
ARVMQSSLEDLVDEGNYCKAFQVLSEYLQLLDSLSEFSAIQEMTRGVEVWLGRTLHKLDS
LLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVISETHSVLKTVVGEDNTA
ATQFSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMSFAPEKKVESYSSTSFA
STPRIDSVSDTSCDPQDGGLSSSMSSAGVPNISAEETSERETSIPVKQASNNAIDDSRDF
GETESSGESPWYYLRKESAALVSETLQRGRRNLWQLTTSRVSVLLSSPTASSTSMHQFLK
NYEDLSVFILAGEAFCGFEVLDFREKLKGVCENYFTAFHRQSMHALKMVLEKETWTKLPP
GTVQAINFAGLVGDGAPLIMSSRNATGSSRFAHSSKSNDSIDPSGNRSGFSYWLKSGNPF
SAKLNYYREDQDYSSVNGAASGDSEGNDSIHEDVVNPKIRDAKRINGGSPVSGDENEDLH
ADYIDEDSQLPRRSFTRSVSRSASSHISTNDDLTAQTGSSLCLLRSMDKYARLMQKLEIV
NVEFFKGICQSFGVFFYFVYQVFGQENTNSGGKGGADSSNHRLKSCLSRISQECEQWIKP
QLSSSPSSSLSFPNTVPSLADVTPASPIKTSGHVSGTSFSLKERCAAVDTVSLVSRILHK
SKAHLQSMLMSRNGSLVEDFFGQLVGSVPDLTEHLHRTTARILLHVNGYVDRIANSKWEV
KELGVEHNGYVDLMLGEFKHYKTRLAHGGISQEVQNLLLQYGVEIFAEMLVEGFSRIKRC
TDEGRALMSLDIQVLINGLQHFVPTKVKPKLQIVETFIKAYYLPETEYVHWARAHPEYTK
AQVIGLVNLVATMKSWKRKTRLEVVDKIESAAA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggttagagagttggagaaagatttgaagattgctaatgtcatctgcaagaat
ggaagacggaatttgacttcttccatgaatgaggcttcaagagatcttattgtacacacc
cattccaagaagaaacaagctcttctggatatgcttcctatattaaccgatcttcgccat
gcaagagtaatgcagtcaagtcttgaagaccttgttgacgaaggaaactattgcaaggca
tttcaagttttatctgagtacttgcagcttcttgacagtctatctgagttttcagcaatc
caagagatgacccgtggtgttgaggtttggttaggaagaactcttcataagctggattca
cttttgttgggcgtttgccaagagttcaaagaagatagttatgtaatggtccttgacgct
tacgcactgatcggtgatgtctctggtctcgccgagaagatacagagcttctttatgcaa
gaagttatctcagaaacacactcagtcctaaagaccgttgttggggaggataacactgct
gccacccaatttagtagacttacatacagcgatctatgtcttcagacaccagaatccaag
tttaggcaatgtcttttgagaacactagctgtgctatttcagttaatatattcgtaccat
gagataatgagtttcgctccagaaaagaaggttgaaagctatagctcaacaagttttgca
tcaactccaaggattgattcagtttcagatacttcttgcgacccacaggatggtggtctc
tcttcatccatgagttcagcaggcgtacccaacatttctgctgaagagactagtgaaaga
gaaacctccattcccgtaaagcaagcgtctaataatgcaatagacgactctagggatttt
ggagaaacagaatctagtggcgagtcaccatggtactatctacgaaaagagagtgctgct
cttgtttcagaaactctgcaaagaggacgcagaaatctctggcaacttacaacaagccgt
gtgtcagttttgctctcgtccccaactgcttcttcaacaagtatgcatcagttcctaaaa
aactatgaagacctgagcgtctttatccttgctggggaagcgttctgtggttttgaagtt
cttgattttagggagaagctgaagggtgtatgcgaaaactattttactgcatttcatagg
caaagcatgcatgcgctcaaaatggtcctggagaaggagacgtggacgaaactgccacct
ggtactgtgcaagctattaattttgccggtcttgtgggggatggggctcccctaattatg
tcttcccgaaatgccactggttcttccagattcgctcactcgagtaagtcaaatgactcg
attgatcctagtgggaacaggagtggattctcatattggttgaaaagtggaaaccctttc
tcagcaaagttaaattactatagagaagaccaagactactcctctgtcaatggagctgcc
tctggagattctgaagggaatgatagtattcacgaggatgttgtaaatcctaagataaga
gatgcaaaacgcattaacggaggtagtcccgtttcaggagatgaaaacgaagaccttcat
gccgactatattgacgaggatagtcagcttccaagacggagctttacacgtagtgtatca
aggagtgcttcttcacatatcagtactaatgatgatttgacggctcaaacaggatcctcg
ctttgtcttctaaggtcgatggataagtacgcgaggcttatgcagaaactagaaattgtt
aatgtggaattctttaagggaatatgccaatcgtttggggtctttttctatttcgtgtat
caagtatttggtcaagaaaatacgaattcaggtggaaaaggaggtgccgactcttccaac
catcgtttgaaaagctgcttatcccggatatcacaagagtgtgagcaatggataaagcct
caattgtcatcatcaccatcttcttcactttccttccccaacacagtccctagtcttgcg
gatgtgactccagcgagtcccataaaaacatctggtcacgtatcaggcacatcttttagt
ctcaaggaaagatgtgctgcagtggacactgtttctcttgtgtctcgaatactgcataaa
tcaaaagctcatctccagtctatgcttatgtcaagaaatggctctctggttgaagacttc
tttggtcaactggttggttccgtacctgatctgacagagcatttacataggacaactgca
aggatactgctgcatgttaatggatatgtcgaccggattgctaattctaaatgggaagtc
aaggagcttggtgtggagcataatgggtatgttgatttgatgctcggggaattcaaacac
tacaaaacaaggcttgctcatggaggcatttcacaggaggtccaaaacctccttctgcaa
tatggagttgaaatatttgcagagatgctggtcgaagggttctctcgaataaagagatgt
actgatgaaggacgtgctctcatgtcattagatattcaggtcctaataaacgggctacag
cactttgtgccaacaaaggtgaagccaaagttacagatagtcgaaacatttatcaaggca
tactatctgccagagacggaatatgtccactgggcaagagctcatccggaatatacgaaa
gcacaggtcattggacttgtgaatttagtagccaccatgaaaagctggaagaggaaaacg
cgtctagaagttgtggataagattgaatcagctgctgcatag
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