Brassica napus (rape): 106446799
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Entry
106446799 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106446799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106446799
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106446799
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
SNARE
Motif
Other DBs
NCBI-GeneID:
106446799
NCBI-ProteinID:
XP_013744046
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Position
A4:14420012..14423175
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AA seq
649 aa
AA seq
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MERASTMQSVHENIKSVRGQLKKVYKTLNTLENWRKAILLVCVVALGVDPLFLFIPVIDS
PNFCFTFDKKLAAVVSAIRTFIDTFYVIHIIFNFITEFIAPRSQVSLRGELIVHSKAMRK
RLFFFHFIVDICSVIPIPQVVVLILIHRSDSLVSQAILKWIILTQYIPRIIRIYPLLKEV
TRASGTIAETKWVGAAFNLFLYMLHSHVFGAFWYVSSVEKKNKCWRLECAKISGCNLRHQ
YCARGRENNGRYLNTTCPLIDPDQIIGSTVFNFGMYTDALRSGIVESKPRDFPRKFFYCF
WWGLRNISALGQNLKTSNSVGDIVFALIICVSGLLLFAVLIGNIQKYLQSTTIRLDEMEE
KKRDTEKWMSNRMLPEYLKERIRRYENYKWRKTRGIEEEALLHSLPKDLRLETKRHLYLT
LLNSVPWFNMMDDSWLLEALCDRVKSVFYSANSYIVKEGDPVAEMLIITKGSLKSMIGSS
DITGYYDSSYLQAGDICGDLLFWVLDPHSSSSLPTSDRSVLTLTDVEGFILLHDDLKFVA
SHFNRFHSSRLRHMFRFYSAHWRLWAACFIQAAWREHYKRKLSRILHAKRDYNHIPQGTQ
LNIGAALYVSRFVSKALRNRQKNAANCSISPHMLPPIPHKPADPEFSKN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagcttcaacgatgcaatctgtacatgagaatatcaagagtgttagaggacag
ttaaagaaggtttataaaactctaaatactcttgaaaactggaggaaggcaatcttgtta
gtttgcgttgttgcattgggtgttgatcctttgtttctcttcatccctgtgattgattct
cctaacttctgcttcactttcgacaagaagcttgcagcagtagtttcggccattcgcacc
tttatcgacacattctatgtgattcacatcatttttaatttcatcaccgagttcatagcc
cctcgttctcaagtgtctttacgaggcgagttaattgtgcattctaaggctatgaggaaa
agactcttcttctttcacttcattgttgatatttgttccgttattcccatccctcaggtt
gtggttctcattcttattcaccggtctgactcgctggtgtcacaagcaatactgaaatgg
attatactcactcaatatataccaagaatcatccgtatctacccgcttttaaaagaagtg
acaagagcctctggaacaatagcagaaacaaagtgggttggtgctgctttcaatcttttc
ctctacatgttgcacagtcatgtgtttggggctttctggtacgtgagttcagtagaaaag
aaaaataaatgctggcgtctagagtgtgctaagatatccggatgtaatctcagacatcag
tattgtgcacgaggtcgcgaaaacaacggtcgctatctgaatactacatgcccattaatc
gaccctgaccaaatcatagggtctacggtcttcaactttggtatgtacactgatgcattg
aggtcagggatcgtagagtcaaagccaagggatttcccaaggaagtttttttactgcttt
tggtggggtctacgaaatattagtgctttaggacaaaatctaaagacaagcaactctgta
ggggatatcgtttttgctctcataatctgcgtctctggtttactcttgtttgctgtactc
attggaaacattcagaagtatttgcaatcaactacaataagattggatgaaatggaggag
aaaaagagagacactgaaaaatggatgtcaaatcggatgctaccagagtatttgaaggaa
cgcattaggagatatgagaactacaaatggcgaaaaactagaggcatcgaagaggaagct
cttcttcatagccttcctaaagacctcaggcttgaaaccaaacgccatctttaccttact
ctcttaaacagtgttccgtggttcaacatgatggatgatagttggttgctagaagcactg
tgtgaccgcgtgaagtctgtgttctactcagctaatagctatatagtgaaagagggtgac
ccggttgcagaaatgctgattataactaaaggcagcctgaaaagtatgatcgggtctagt
gatataactggctactatgattcatcgtacctccaagcaggtgacatatgtggagatctt
ctcttttgggttcttgatccacattcttcttctagcctccccacctcagaccgatcagta
ttgactctgacggatgttgaaggcttcatcctcttgcatgatgatcttaagtttgtagct
tctcatttcaatcgctttcacagcagtaggctcagacacatgttcaggttctattcagcg
cattggcgattatgggcggcatgcttcatacaggcagcatggagggaacattacaaaagg
aagctttctaggatcttacacgccaaaagggactataatcatatcccacaaggcacacaa
ctcaatattggagcagctctatatgtgtcgagatttgtatccaaagcattgcgaaatcga
cagaaaaatgcagcaaattgttccatatctccacatatgttacccccaatacctcataaa
ccagctgatcctgagttttcaaagaattaa
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