Brassica napus (rape): 106447127
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Entry
106447127 CDS
T04128
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1 isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106447127
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106447127
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_RFWD3
PALB2_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106447127
NCBI-ProteinID:
XP_013744440
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Position
A9:7134518..7137276
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AA seq
471 aa
AA seq
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MGRSINPKKAKRKNKKKGEASSSSVPSMPTRVWQPGVDKLEEGEELQCDPSAYNSLHGFH
VGWPCLSFDILGDKLGLNRTEFPHTLYMVAGTQAEKAPLNSIGLFKISNVSGKRRDVVPK
TVNGDDAMEDEDDEDEDSDSDEESEDGASTTPIIQVRRVAHHGCVNRIRAMPQNPHICVS
WADSGHVQVWDMSSHLNALAESETEGKDGTSPALNQAPLVNFSGHKDEGYAIDWSPATAG
RLLSGDCMSMIHLWEPASGSWTVDPIPLTGHTASVEDLQWSPAEANVFASCSVDGTIALW
DVRVGKTPALSFKAHNADVNVISWNRLASCMLASGSDDGAFSIHDLRVIKEGDAKVAHFE
YHKHPITSIEWSAHESSTLAVSSGDNQLTIWDLSLEKDEEEEAEFKAQTKEHVNTPQDLP
PQLLFVHQGQKDLKELHWHNQIPGMIISTAEDGFNILMPYNIQNTLPDLAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcagcataaaccctaagaaggcaaagaggaagaacaagaagaagggagaagcg
tcttcctcctcggtgccatcgatgccaacaagggtttggcagccaggtgtggataagctc
gaagaaggagaagagcttcagtgcgacccttctgcttataattcccttcatggcttccat
gttggttggccctgtttgagttttgacattttaggtgataagttgggtttgaaccgaact
gagtttcctcacaccttgtatatggtggctgggactcaggcggagaaagcacctttgaac
tccattggattatttaaaattagcaacgtgtctgggaagagacgtgatgtagttcccaag
acggttaatggtgatgatgctatggaggatgaggatgatgaagatgaggacagtgatagc
gatgaggaaagtgaagatggagcttccactactccgattattcaggtccgcagagttgct
caccatggatgtgttaaccgcattcgtgcaatgccacagaatcctcatatatgtgtctct
tgggcagattctggtcatgtacaggtgtgggacatgagctctcatcttaatgctttggca
gagtcagaaacagaaggtaaagatggaacttcaccggctctaaaccaagcacccttagtt
aacttttctggccacaaagatgaaggctatgctatagattggagtcctgcaacagctgga
agacttctttccggggactgcatgagtatgattcatctgtgggaaccagcttctggttca
tggactgttgatcctattccgttaacaggacacaccgcaagtgttgaagatttacaatgg
agtccagctgaagccaacgtgtttgcatcctgttctgtggatgggactattgcactatgg
gatgtccgagttgggaagacgcctgcattatctttcaaagcacataacgcagatgtgaat
gttatctcatggaacaggctggctagttgcatgttggcttcaggaagtgacgatggagca
ttctctatccatgatcttagagttatcaaggagggagatgctaaggtagcacattttgag
tatcataagcatcctatcacgtcgattgagtggagcgctcatgaatcctcaacacttgca
gtctcttccggcgacaaccagctcacgatatgggatttatccttagagaaggatgaagaa
gaggaagcagagttcaaagcacagaccaaggaacatgttaacacacctcaagatttgcct
cctcagcttcttttcgttcaccagggacaaaaggacttgaaggaactccactggcacaac
cagattccagggatgatcatctcaactgctgaagatgggttcaacatcttgatgccttac
aacattcagaacacacttcctgatctcgctgcctga
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