Brassica napus (rape): 106447128
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Entry
106447128 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106447128
03083 Polycomb repressive complex
106447128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106447128
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106447128
Histone modification proteins
HAT complexes
HATB complex
106447128
HDAC complexes
Sin3A-HDAC complex
106447128
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106447128
PRC2.2
106447128
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106447128
Heterochromatin formation proteins
Other heterochromatin formation proteins
106447128
Chromatin remodeling factors
NuRD complex
106447128
NuRF complex
106447128
NuRF complex (fruit fly)
106447128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Ice_binding
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106447128
NCBI-ProteinID:
XP_013744443
LinkDB
All DBs
Position
A9:7130765..7134067
Genome browser
AA seq
506 aa
AA seq
DB search
MESDEASAAAAAASPQASGGTVTPAPKKRGRKPKSKDESQEQISGGKMKESGKKTKQQEE
QSVDDKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVA
THTDSPDVLIWDVETQPNRHAVLGAASSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKD
KMVVLWSIQDHITTVGTDSKSSGSIIKQTGEGGDKTESPSVGPRGVYQGHDDTVEDVAFS
PTSAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNT
VRLYDRRNLTSNGVGTPIYKFEGHKAAVLCVQWSPDKASVFGSSAEDGLLNIWDYDRVSK
KSDRAAKNPAGLFFQHAGHRDKVVDFHWNAADPWTIVSVSDDCETTGGGGTLQIWRMSDL
IYRPEEEVLTELEKFKSHVMTCASKP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcatcagcagcagcagcagcagcgtctcctcaagcgagcggagga
accgtaacaccggcgccgaagaaacgaggccggaaacctaagagcaaagacgaatctcag
gagcagataagcggtgggaagatgaaggagagcgggaagaagacgaagcagcaggaggag
cagagtgtggacgataagtactctcagtggaaaggtctcgtccccattctctacgactgg
ctcgccaaccacaacctcgtctggccttctctctcttgcagatggggtccacaactcgac
caagctacctacaagaaccgccagcgtctttacctctctgaacaaactgatggcagtgta
cccaacactctagtcatagcgaattgcgaagttgttaagccacgggttgctgcggcagag
cacatttctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagaccatc
attcaccctggagaggttaacagaatcagggaactcccacaaaacagtaagattgttgct
actcatactgatagtcctgatgttctcatttgggatgttgaaacccagccaaaccgtcat
gctgtgcttggtgctgcaagttcccgtccggatttgatactaactggacaccaagacaat
gctgaatttgctcttgcaatgtgcccaaccgaaccctttgtcctctctggaggcaaggac
aagatggttgttttgtggagtatccaggaccacatcacaacggttggtacagattccaaa
tcatctggatccatcatcaaacagactggtgaaggtggtgataagaccgagagtccttct
gttggcccgagaggtgtatatcaaggccatgacgatacggttgaagatgtcgcattcagc
ccgaccagtgcacaagaattctgcagtgttggtgacgactcttgccttatactgtgggat
gcaagaactggcactagccctgtcacgaaggttgaaaaggcgcatgatgctgatcttcat
tgtgtcgattggaatcctcatgacgacaatctcatcctgacagggtctgcagacaacact
gtccggttgtatgatcgtaggaaccttacctccaatggagttggtacgcctatttacaaa
ttcgagggccacaaagctgctgttctttgcgttcagtggtctcctgataaggcatctgtt
tttgggagttccgcagaagatggtctcttgaacatctgggattatgacagggtcagtaag
aagtctgatcgtgcagctaagaaccctgcagggctcttcttccagcatgccggtcacagg
gacaaagttgtcgacttccactggaacgctgcggacccttggactatagtcagtgtttct
gatgactgtgagactactggtggaggtggaacattgcagatatggcggatgagtgacttg
atttacagaccggaagaggaagttctgacagaattggagaagttcaagtcgcatgtcatg
acatgtgcgtccaagccttga
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integrated database retrieval system
