Brassica napus (rape): 106447140
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Entry
106447140 CDS
T04128
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106447140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106447140
03110 Chaperones and folding catalysts [BR:
bna03110
]
106447140
03029 Mitochondrial biogenesis [BR:
bna03029
]
106447140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106447140
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106447140
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106447140
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106447140
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106447140
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106447140
Exosomal proteins of other body fluids (saliva and urine)
106447140
Exosomal proteins of breast cancer cells
106447140
Exosomal proteins of colorectal cancer cells
106447140
Exosomal proteins of bladder cancer cells
106447140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
106447140
NCBI-ProteinID:
XP_048634172
LinkDB
All DBs
Position
A4:complement(17454739..17458492)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRLVSNIASQARNARKCTPQFGSMLSSTRSYSAKDTRSGVKELADTGQVTIGPKGYNVT
IEQKDDGSITITQSWRAPKVTKDDVTVAKSNESKGRVNNVGASPVKQVAKATNNVAGDGT
TYATVLTRAIFTEACKSVTPEKSAYHAAYNAMHLRLGIKLAVDTVVKTLKSRARMISTFE
EIAQVGTASANGDREIGELIAKAMESVGKEGVITVQGGNTLFNELEVVEGMKIDRGYRSP
LFITNEKYQTCFVNDPLPYIHDNKVHDIESLSKVLDLALKKQRSLLIVAEDLDSFSVAGL
VWKTPRSNVKAPGFGENRRAYMHDLATLTGAQVITEERGMSLEKIELGMLGTCKKVIVSK
DNTVFIGGAGDKKYIGERCEQIRSMVEANESDYDKDMLQDRLANLSGSIAVIKIGGTSER
EVSEKIDRVNNALNATKAALEEGIVPGGGVALLYASKELEKLSKNYISQKNGVQIIQNAL
KIPVYTIASNAGVDGKVIVDKLLESNNPDIGYDAAKGEYVDMVKSGIIDPVKMIRTALVD
AASVSLLLTTTEAVVTEIPTKEDASPVMGGMGF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgacttgtctccaacattgcttcacaagctagaaacgccagaaagtgtacaccc
cagtttggaagcatgctcagttccactaggagttattcagcaaaagacacaaggtccggt
gttaaggagcttgctgatacaggtcaagtcactattggacccaaggggtataatgtcacc
atcgaacaaaaagatgatggtagtatcaccatcacacaaagctggcgtgcaccaaaggtg
acaaaggatgatgttactgttgccaagagcaatgagtccaagggcagagtcaacaacgtt
ggtgccagtcctgtcaaacaggttgctaaagccacaaataatgtagctggtgatggaacg
acgtatgctacagtccttacaagagctatcttcacggaagcttgtaaatcagttactcct
gaaaagagtgcatatcatgctgcatataatgcaatgcatttaagacttggtatcaagtta
gcagttgatactgttgtgaagaccttgaagagtagagcacgcatgattagcacttttgaa
gaaattgcccaagttggaacagcatcagctaatggagatagggagattggtgaacttatt
gcaaaggctatggaaagtgtcggcaaagagggagtgatcacagttcaaggtggcaacact
ttgtttaacgagttggaagttgttgagggtatgaagattgacaggggatacagatcccca
ctcttcattacaaacgagaaataccaaacatgttttgttaatgatcctctcccttacatc
cacgacaacaaagttcacgatattgaatctctgtctaaagtcttagacttggccctcaag
aaacaaaggtcgcttctgatcgttgcggaggatttggatagcttttctgttgctgggcta
gtttggaaaacccctcgttctaatgtgaaggcccctggttttggagaaaaccgtagggct
tatatgcacgatctagctaccctcacaggagcccaggtaataacagaagagagaggtatg
agtcttgagaaaatcgaactcggtatgctaggaacctgcaaaaaggtaattgtatccaaa
gacaacactgtttttattggtggggctggtgacaagaaatatattggagaacgatgtgaa
cagatacgatccatggttgaagcgaacgagtctgactatgacaaggatatgttacaagac
aggttggctaacctttctgggagtattgctgtaataaagatcggaggaacgagtgagaga
gaagttagcgaaaagatagatagagtaaacaatgctctaaatgcaaccaaagcagcttta
gaagaaggtattgttccaggcggtggtgttgctcttctgtacgcgtcaaaagaacttgag
aagctttccaaaaattacattagtcaaaaaaacggtgtccaaatcatccaaaacgctctc
aagatacctgtttacactattgcttccaacgctggagtcgacggtaaagtcatcgttgac
aagcttttggaatcaaataatccggacatcggttatgatgctgctaaaggagaatacgtg
gatatggtgaagtctggtattatcgaccctgtgaaaatgatcagaaccgcattggttgat
gctgctagtgtctcgcttttgttgactaccacggaagcagttgtgaccgagattccaaca
aaagaagatgcgtctcccgttatgggtggtatgggtttctga
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