Brassica napus (rape): 106447290
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Entry
106447290 CDS
T04128
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106447290
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106447290
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
106447290
NCBI-ProteinID:
XP_013744650
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Position
A1:complement(12735887..12738700)
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AA seq
357 aa
AA seq
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MAGFFSLGGGGGGGGGGNSQEEHRNPPPPVSEAWLWYRNPNTNANAPSSSNAALGTLELW
QNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHSQFDISGETSNAAAGRAAALMMMRS
GGSGGGGNGASCQDCGNQAKKDCAHVRCRTCCKSRGFDCPTHVRSTWVPAAKRRERQHQL
ATVQPQTHQPRGDSGVPKRQRENLPATSSALVCTRIPTHNASGLEVGDFPTEVSSPAVFR
CVRVSSVEDGEEELAYQTAVSIGGHIFKGVLYDNGPGSSGGYNAIATGESSSGGGGGHQL
NLITAGSVTVATASSSTPNAGRIGSSSAASYNDPSSLYPTPINTFMAGTQFFPNPRS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttttctcgttaggcggtggaggaggaggcggagggggaggaaacagccaa
gaagaacaccggaatcctcctccgcctgtatcagaggcttggctctggtacagaaaccct
aacacaaacgcaaacgccccttcctcttcaaacgctgctttaggcacacttgagctatgg
caaaaccacaatcagcaagaaatcatgttccagcatcaacaacatcaacaaaggttagat
ctttactcctcagccgctggtttaggagtcggaccaagcaaccatagtcaattcgatatc
tccggcgaaacctcaaacgccgccgccgggagagcagcggcgctcatgatgatgcggagt
ggcggaagcggcggaggaggaaacggtgcgagctgtcaagactgtgggaatcaggcgaag
aaagactgtgctcacgttaggtgtcgaacttgctgcaagagccgtggcttcgactgtcct
acgcacgtgaggagcacgtgggttcctgccgcaaaacgccgtgagagacaacatcagcta
gccacggttcagcctcaaacgcaccagccacgcggtgacagcggcgtacccaaacgccaa
cgtgagaacttaccagcaacttcttctgctcttgtctgcactcgcatacctacccacaac
gcttcaggtttagaggttggagatttcccaacggaggtgagctcaccggcagtgtttaga
tgcgtgcgagtgagctctgtggaagatggagaagaagagcttgcttaccaaacagccgta
agcatcggtggtcacatctttaaaggcgttctctacgacaacggtcctggaagtagcggc
ggctacaacgcaatcgccacgggtgagagctcttctggtggcggaggaggacaccagctg
aatctcataacagctggatctgtgactgtcgcaacggcttcttcctccactccaaacgcc
ggtcgtataggcagctcctccgctgcgtcttacaatgatccatcctctctttatccaact
ccgattaacactttcatggccggtacacagttctttcctaacccaagatcatga
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