Brassica napus (rape): 106447528
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Entry
106447528 CDS
T04128
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106447528
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP100
106447528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
TniB
nSTAND3
NACHT
AAA_18
AAA_14
Mg_chelatase
AAA_28
Zeta_toxin
AAA_25
IstB_IS21
AAA_23
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
106447528
NCBI-ProteinID:
XP_013744927
LinkDB
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Position
A1:13905510..13909760
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AA seq
928 aa
AA seq
DB search
MARLLANFTARPLLGPGRHVQSDDYRKPRRCVKMMYTSQTPVLSIQSFSGLRSANAVDLI
ARPAHGFFSKVNLQISSRKGKASRCVTKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTE
QILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGVDASNIRTQVIRMVGENNEVTAS
VGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGE
PGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIR
QSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPTVDEAIQILHGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPD
KAIDLIDEAGSRVRLRHAQVPEEARELEKQLRQITKEKNEAVRSQDFEKAGSHRDREIEL
RAEIAAVLAKGKEVSKAETEAGEEGGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLLKM
EQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLKDKEI
ELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSREIKDGDSVIVDVDAE
GSVVVLNGKSGGGGSFAEEAMEDPILVL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctcttggctaatttcacagcccgtcctttacttggtcccggaagacatgtt
cagtccgacgactatagaaaaccaagacgatgtgtgaagatgatgtacacttcacaaacg
ccggttttgagcatccagagcttctcagggttaaggtctgccaatgcagtggatctaata
gcaaggcctgctcatggtttctttagtaaagttaaccttcaaatctcttcccgcaaagga
aaagcgagccgatgtgtgacaaaagccatgtttgagcggttcaccgagaaagctatcaag
gtcataatgctgtctcaagaggaagctcggagacttggacataactttgttggcactgag
cagatactgttgggtctcattggggaagggactggaatcgctgcaaaggttcttaaatcc
atggggatcaatcttaaagattctcgcgtggaggtggagaagatcattgggagaggcagt
ggattcgtggctgtggagatcccattcactcctcgtgcaaagcgtgtcctggagttgtct
ctagaggaagctcgacaactcgggcataactacattgggtcagagcatcttctgcttggt
cttcttcgtgaaggggaaggtgttgcagctcgtgtcctggagaatttgggtgtagatgct
agtaacatccggacgcaggttatacgtatggtcggagaaaacaatgaagtgaccgcaagc
gttggtggaggatccagcggaaacagcaagatgccaacgctagaagagtatgggactaac
ttaactaaactagcagaggagggaaaactagatccggttgtgggaaggcagccacagatt
gaacgagtggtccagatcttggctcggagaaccaagaacaacccctgtctaattggagaa
cctggagttggtaagacagcaatagctgaaggactagcacagagaatagccagtggtgat
gttcctgaaacaattgaggggaagacggttataacccttgatatgggtcttctagtggct
ggaacaaagtaccgtggagaattcgaggaaagattgaagaagcttatggaggagatcagg
caaagtgatgacatcattctgtttatcgatgaagtgcacactctgatcggcgcaggagcc
gctgaaggtgccattgatgctgccaacatcttaaagccagctcttgccagaggtgaattg
cagtgtattggtgcaacaacgttggatgagtacagaaagcatattgagaaagatcctgca
ttagagagaaggttccagcctgtgaaggtacctgaaccaactgtagatgaagctatacag
atcttgcacggtctgcgtgagcgttatgagatccaccacaagctccggtacactgatgaa
gccttggttgctgctgcgcagttgtctcatcagtacatcagtgatcggtttcttccggac
aaagcgattgacttgattgatgaagctgggtctcgagttcgactacgccatgctcaggta
cctgaggaagctagggagcttgaaaagcaactcagacagatcacaaaggagaagaatgaa
gctgtaagaagccaagactttgagaaggctggttctcaccgtgaccgggaaatagagctt
agggccgagatagctgcagttttagccaaaggcaaagaagtgagcaaagctgagactgaa
gctggcgaagaaggaggaccaactgtcactgaatccgacatccaacacattgtctccacc
tggacaggaatccctgtagagaaagtctcgtccgatgaatctagccgtcttctcaagatg
gagcagacccttcacacaagagtcattggccaagacgaagcagtcaaagctataagccga
gccatcagacgtgcgcgtgttggactcaagaacccgaaccgcccaatagcaagtttcatc
ttctctggtccaaccggtgtggggaaatcagagcttgccaaagccttggctgcttactac
ttcggttcagaggaagcaatgatccgtctcgacatgagtgagttcatggaacgacacacc
gtctcaaaactcatcggttcacctcctggctacgtagggtacacggaaggaggtcagtta
actgaggcagttcgacgcaggccttacacgcttgtcctcttcgacgaaatagagaaagcc
catcctgatgttttcaacatgatgcttcagatcctagaagacgggagactcactgacagc
aaaggaagaaccgttgatttcaagaacacgcttctgatcatgacatcgaacgtaggaagc
agcgtgattgaaaagggcggtagaagaatcgggtttgatctggactacgacgagaaagac
agcagctacaacaggatcaagagcttggtcactgaggaactgaaacagtatttcagaccg
gagttcttgaacaggttagatgagatgattgttttcaggcagctgacgaagctggaagtg
aaggagattgctgatataatgcttaaagaagtggtggtgaggcttaaggacaaagagatt
gagcttcaagtgaccgagaggtttaaggagagagttgtagatgaagggtttgacccgagc
tacggtgcgaggccgctgagaagagcgataatgaggctgttggaagatagcatggcggag
aagatgctttcaagggagattaaagatggagattcagtgattgttgatgttgatgctgaa
ggaagtgtggttgtgttgaatggtaagagtggaggtggtggtagttttgctgaagaagcc
atggaagatcctattcttgtcttgtag
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