Brassica napus (rape): 106447550
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Entry
106447550 CDS
T04128
Name
(RefSeq) long chain base biosynthesis protein 2b isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
bna04382
Cornified envelope formation
Module
bna_M00094
Ceramide biosynthesis
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106447550
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106447550
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106447550
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106447550
Amino acid related enzymes [BR:
bna01007
]
Aminotransferase (transaminase)
Class II
106447550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
106447550
NCBI-ProteinID:
XP_048632796
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Position
A1:complement(13921513..13924257)
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AA seq
489 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDYSRRIFDWWSTNNLHGYAPICLAHEDFYIRRLY
HRIQDCFGRPISSAPDAWVDVVERFSNDNNKTLKRTTKSTRCLNLGSYNYLGFGSYDEYC
TPLVIDSLKKFSPSTCSSRVDAGTTSVHAELEECVAKYVGKPAAIVTGMGYATNSAIIPV
LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPAHLERVLKEQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICQLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKYHCPAHLYATSISTPSAQQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
ENVAVVVVGFPATPLLLARARICISASHSREDLIKALQVISKAGDLTGIKYFPAAPKKQE
EVKDTIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgataacgatcccatacctaaccgctgtatcgacctacttcagctacggattgctcttc
gccttcgggcagctccgcgattactcccggcgaatcttcgattggtggagcaccaacaac
ctccatggatacgccccgatctgcttggctcatgaggatttctacatcagacgtttgtat
catcgcattcaggattgttttggacgtcccatctcaagtgcacctgatgcttgggttgat
gtcgtcgagaggttctctaatgacaacaacaagaccctcaagagaacaacaaagagcaca
agatgccttaacttgggctcttacaactatcttggatttggttcttatgatgaatactgc
acccctcttgttatcgactctttgaagaaattctccccaagtacttgcagctcccgagtt
gatgcagggactacctctgtacatgcggaactcgaggaatgtgttgctaaatatgtcggc
aaacctgctgctattgtcactggcatgggctacgctaccaactccgctatcatccctgtc
ttgattggaaagggagggctgataataagcgattctttgaaccatacctcaattgtcaat
ggtgctcgaggttcaggagctactatccgtgtcttccaacacaacacacctgcgcatttg
gaaagagtgttgaaagaacaaatcgctgagggacaacctaggacacacagaccctggaag
aaaatcatcgttgttgttgagggtatttacagcatggaaggggaaatttgtcaactgcct
gagattgtctcaatatgcaaaaagtataaggcttatgtctacttggatgaagctcacagc
attggagcaattggaaaaacaggcaggggagtttgcgagcttcttggagttgacactgct
gatgtggacataatgatgggaacttttaccaaatctttcggatcttgtggtggctatatt
gccggatccaaggaccttatccaatatttgaagtaccattgcccggctcacctttacgca
acatcaatctcaactccttccgcgcaacaaatcatatcggccataaaagttatccttgga
gaggacggttctaacagaggtgcacaaaagttagcaaggataagggagaacagcaacttt
ttcagggctgagttgcagaagatgggatttgaggttcttggagacaatgattccccagtc
atgccgataatgctttacaatcctgcgaaaatcccagccttctcaagggaatgcttgcga
gaaaacgtggcagttgtggttgttggtttcccagctacacctctgttgctagccagggct
cgtatttgtatatccgcatctcactcgagagaagatcttattaaagctctacaggttata
agcaaagcaggtgaccttaccggaatcaaatattttccagcggctccaaagaagcaagaa
gaagtgaaagataccatcaaattggactaa
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