Brassica napus (rape): 106447852
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Entry
106447852 CDS
T04128
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106447852
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
106447852
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
ArsR
Motif
Other DBs
NCBI-GeneID:
106447852
NCBI-ProteinID:
XP_013745264
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Position
A1:complement(13861212..13862823)
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AA seq
468 aa
AA seq
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MIRRPIQNSSAVSRHLTSPISLFSRFLFSSSSENNTHEPIVSNRNPKSPFGSPTRVQKLI
ASQSDPLLAKEIFDYASQHPSFRHSQSSHLVLILKLGRSRHFNLIDDVLAKHRSSGYPVT
GELFTYLIKVYAEAELPEKAFKTFYKMIEFNFTPQPKHLNRILEVLVSHRGYLQKALELF
KSARLHGVMPNTRTYNVLMRAFCLNDDLSIAYKLFGKMLERDVVPDVESYRILIQGFCRK
GQVNGAMELLEDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDIVHY
NTMILGFCRQGRAMDARKVLEDMSSNGFPPDSVSYRTLIGGLCGQGMFEEGKKYLQEMIS
NGFSPHFSVSNCLVKGLCSFGKVEEACDVVELVMKNGDALHSDTWEMIIPIVCKEDDSEK
IQRFLEDAMKVEISGDTRLVDAGIIALGSYLSSKRQLKRMNVRERRRL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccggccgatccagaactcctccgccgtgtctcgtcacctaacttctccaatc
tctctattctcccgttttctattctcttcttcatctgaaaacaatacccatgagcccatt
gtatcaaaccggaaccctaagtcaccatttgggtctccgacccgcgttcaaaagctcata
gcttcgcaatcggatcctctcctcgcgaaagagatcttcgattacgcctcacaacatccc
agtttccgtcactctcaatcttctcacctcgtcctcatcctcaaactcggccgttcgaga
cacttcaatctcatcgacgacgttctcgccaagcacagatcgagtggttacccagtcacc
ggagagcttttcacgtatcttatcaaagtctacgcagaagcagagttacctgagaaagct
ttcaagacgttttacaaaatgatcgagttcaatttcactccacaacccaagcatctgaat
cggatcctcgaggtcctcgtaagccatagaggttatctccagaaagctttagagcttttc
aagagtgcccggcttcacggggtgatgcccaacacgagaacatacaacgtattgatgcga
gccttttgtttgaacgatgacttgagtattgcgtacaagttgttcggcaaaatgcttgag
agagatgttgtccctgatgtagagtcttataggattcttatacaagggttttgcaggaaa
ggacaagtgaatggtgctatggagttgcttgaagatatgttgaataaagggtttgtgcct
gataggttgagttacacgacattgttgaatagtttgtgtaggaagacacagcttagagag
gcttataagcttctatgtaggatgaagttaaaaggttgcaaccctgatattgttcattac
aacacgatgattctcgggttctgtagacaaggtcgtgctatggatgctaggaaggttctt
gaagatatgtcatctaacggtttcccacccgattcggtctcgtataggacattgattggg
ggattgtgtggtcaaggaatgtttgaggaaggcaagaagtatctacaggagatgatatcg
aatgggttttctcctcatttttcggtttctaattgtttggtgaaagggttgtgcagcttt
gggaaagtagaagaagcatgtgatgtggtggagctcgtgatgaagaatggggatgcattg
cattcagacacttgggaaatgataattcctattgtctgtaaagaagatgactctgagaag
atccaaaggtttcttgaagatgctatgaaagtagagataagcggtgataccagactcgtt
gatgcgggtatcatcgctttagggtcttatctttctagtaagcgacagttgaaacgtatg
aatgtgagagagaggagacgtttgtag
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