Brassica napus (rape): 106447881
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Entry
106447881 CDS
T04128
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106447881
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106447881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Chromo_2
Chromo_shadow
DUF8026
Motif
Other DBs
NCBI-GeneID:
106447881
NCBI-ProteinID:
XP_013745287
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All DBs
Position
A1:complement(13887350..13891609)
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AA seq
614 aa
AA seq
DB search
MGVKYLWEVVEPCKKRYPLDHLQNKRVCVDLSCWMVELHKVNQSYCATKEKVYLRGFFHR
LRALIALNCSIILVSDGSIPGIKVPTYRRRLKARFEVADDGGVEPGKETSLRRNKGSEFS
CMIKEAKVIASTLGILCLDGVEEAEAQCALLNSENLCDACFSSDSDIFLFGAKTVYREIC
LGEGGYVVCYEMEDIKKKLGLGRNSLIALALLLGSDYSQGVRGIRQEKACEIVRSVGENV
ILEKVSSEGLAFVKNKRNSKKQIRPKKGTLPLVAVNGSSHDPEGLQEIKEVIDAFMNPKC
HNADSNTVSRALAEFTFQRTKLQEICHQFFEWPSEKTDEYILPKIAERNLRRYAILQSRS
TEVGVNRPLHKLQVPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLETSIVPADLVERACP
EKIIEFKEKMEAKKKKKKKKPKQKQPKSKEKETSSPSKASSLIELSLQLQQIDLSSTSDL
ATSTIEEAEQEKEQQKSKKHDYLRLIDSPAKENSSIGWSTIGKFGVGSSSYSFYPETEVI
DLISPCPEARSRNVSRSYQEQKSQEQKCLHHKLENVIELSDSETDDDDDDDGEHCRKARE
LRMFLQNIRKDVIR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaagtatctgtgggaagtagtagagccttgcaagaagagatatccactcgat
catcttcaaaacaagagggtatgcgtggatctctcgtgttggatggtggaattgcataaa
gtgaaccagtcgtattgcgccactaaagaaaaagtttatctccgaggcttctttcatcgt
cttcgagccctaattgccctaaactgctccatcattctagtctcagatggttcaattcct
ggaatcaaagtaccaacgtacaggcgtcgattaaaagcaagattcgaggttgctgacgat
ggcggcgtcgaacctgggaaagagacttcactcagaaggaataaggggtctgagttctct
tgcatgataaaagaggccaaagttattgcttccacactggggatactctgtttagacggg
gttgaggaagctgaagcacaatgtgctctgttaaactctgaaaacttatgtgacgcctgt
tttagctctgattcagatattttcctttttggggcaaagactgtgtaccgagagatatgc
cttggtgaaggaggttacgttgtttgctatgagatggaagacatcaagaaaaagcttggg
cttggacggaactcattgatagctctggcgcttctgcttggcagtgactactctcaggga
gttcgtggtattcgtcaggagaaagcctgcgagattgttaggtctgttggagaaaacgtt
atccttgaaaaagtttcatcagaaggactcgcttttgtcaaaaataagagaaattcaaag
aagcaaattaggcctaaaaaggggaccttacccttggtggctgtaaatggaagtagtcat
gatccagagggactgcaagagatcaaagaggtgatcgatgcgttcatgaatcccaagtgc
cacaatgcagactctaatacagtttccagagctctggctgaattcactttccagcgcacc
aagctacaggagatatgccaccagttctttgagtggccctctgagaaaacagatgaatac
atacttcctaaaatcgctgaaagaaatctgagaaggtatgctattctgcaatcaagatca
actgaggttggcgttaaccggcctctccacaagctacaggtgccagagaagtgcccggtg
tctgaaatcattaagactcgcaaagtacagggacgagaatgttttgaagtctcatggaat
gatctagaagggctagagacgtctattgttcctgcagatcttgtagaaagggcttgtcct
gagaagatcatagagttcaaggagaaaatggaagcaaagaagaagaagaagaagaagaag
ccgaaacaaaaacaacctaaatcaaaagagaaggaaacaagttcaccgagtaaagcttct
tcacttatcgaactcagcctccaactccaacagattgatcttagttcaacatctgaccta
gctacaagcaccatagaagaagcagagcaagagaaagaacagcaaaaatccaagaaacat
gattacttgcgtctaatcgattcacctgctaaagaaaattccagtattggttggtcgacc
attggtaaattcggtgttggctcgagctcttattcattctatccagaaacagaagtcatt
gatctgataagcccttgtcctgaagctcggtcacggaacgtgtcaagaagttatcaagaa
cagaagtctcaggagcagaagtgccttcatcacaaacttgagaatgtgattgagctgagt
gattcagagacagatgatgatgatgatgatgatggtgaacattgcagaaaagccagagag
cttaggatgttcttgcaaaatattaggaaagacgttatccgctga
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