Brassica napus (rape): 106448818
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Entry
106448818 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106448818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106448818
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106448818
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_16
Motif
Other DBs
NCBI-GeneID:
106448818
NCBI-ProteinID:
XP_013746102
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Position
A4:complement(17475951..17479355)
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AA seq
795 aa
AA seq
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MVGTDHSLPFSTARNLPWILRSESKRISQSELAKRPDPFFLPDLLDGFEESKYGWLADDV
KRLCELKRKLLNGSVSVEETETSQKKEKPDDVLSQESVTIGDCSGSDASHNEEDSSSIHT
DDDNGTHPYGVGEEEEAELWRQMAFAQESSKVTVENLQDNDPKQVEDCEHSFIYKDDVGE
VCRVCGLIKTPIESIIEVVYYKPKRSRRTYTREQEEDTETTRMDFTETHSNNILGDKMFI
HPRHDNEMRPHQIEGFKFLCNNLASNEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQAK
PLIVLPKGIIESWKREFTKWAVENIPLYDLYSVKADSRRQQLKVLREWVEERSILFLGYQ
QFAKIICDDSISIDDEVSEDCKRILLEKPTLLILDEGHTSRNKETNMLISLARVKTRRKV
VLTGTLFQNNVEEVFNILNLVRPKFLKRHREIVSRIMSKAEIPSGKHMNQSSIENTFFAA
VELTLSRESSAKASMIKDLREMTRHVLHYHKADFKGLLPGLSEFTVMLNLSSLQRDEIKG
LREMDLFKQISLGAALYIHPKIKAFLEANPSNGEKGFADNLLKKLDTLLKKINVKDGAKM
KFFLNLVSLCESTGEKLLVFSQYIIPLKTLERLMTLTKGWRLWKEMFTITGDSSSGEREV
SMERFNTSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRR
VFAYRLVAADSPEEESFETCSRKEMMSKMWFEWNIECGGGRRDEFGFRDVDVDQCGDVFL
ETTKMKEDIKSLYTR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtactgatcactctctaccattctcaacggcgaggaacttgccttggattttg
aggtcggagagcaagaggattagccaatcagaactcgccaagcgtcctgacccgttcttt
ctaccggatctacttgatgggtttgaagagagcaaatacggttggcttgctgatgatgtt
aagaggctttgtgagctcaaaaggaaactcttgaacggttctgtctcagtggaagagaca
gaaactagtcagaagaaggaaaaaccagatgatgtgttgtctcaagaatcagtaactatt
ggagattgctcaggatctgatgcaagtcataacgaggaggattcatcaagtattcataca
gatgatgacaatggaactcatccatatggagttggtgaagaagaagaagcagaactttgg
aggcaaatggcttttgctcaagagtcatctaaggtaacagtggagaatctacaagacaac
gatcccaaacaagtagaagactgtgagcactccttcatctacaaggacgacgttggagaa
gtctgccgtgtttgtggactcatcaaaacacccatcgaaagcatcatcgaagttgtctac
tacaagccaaagagatcaagaagaacttacacacgcgaacaagaagaagacacagaaaca
acgaggatggacttcacagaaacccactctaacaacatcttaggagacaagatgttcatc
cacccaaggcacgacaacgagatgagaccccaccaaatcgaaggcttcaagttcctatgc
aacaacctcgcatccaacgagccaggcgggtgcatcttagcacacgcgccgggctcaggc
aaaacattcctcctcatcagcttcctccaaagcttcatggccatggatccgcaagccaaa
ccgctgatagtcctcccaaaggggatcatagagtcgtggaagagagagttcactaaatgg
gcggtggagaacatccctctctatgatctctacagcgtcaaagccgattcaagaagacag
cagctcaaggtgttgagagaatgggttgaagagagaagcatactctttctcggttaccaa
cagttcgccaagatcatatgcgatgatagcattagcatagatgatgaggtttcagaagat
tgcaagcgtattctcctcgagaagccgacgctgcttatcctcgacgagggacatacatct
agaaacaaagagacgaacatgcttatctcactcgcacgtgtaaagactcgtaggaaagtt
gttctcacggggacattgtttcagaacaacgttgaggaagtgtttaacattttaaaccta
gtccgtcccaagttcttgaagcgtcatagagagattgtttctcgcatcatgagcaaggcg
gagatacctagcggcaaacatatgaaccagagtagtattgaaaacactttcttcgctgcg
gtggagcttacattgagtagagagagttcagctaaagcgagtatgattaaggatctacgc
gagatgacacgtcacgtcttgcattatcacaaagcggacttcaaagggttgcttccaggg
cttagtgagttcactgtgatgctcaacttgagctcacttcagagagatgaaatcaaaggc
cttagggagatggatctgttcaagcagatctctctcggtgctgctttgtatatacacccg
aagattaaagccttcttggaggcaaacccttcgaatggagaaaagggtttcgctgataac
ttgctgaagaagctagataccttgctgaagaagattaacgttaaagacggcgccaagatg
aagttcttcctcaacctcgtgtctctctgcgagtcaacgggtgagaagctgttagtcttc
agccaatacatcatccctctcaagactctcgagaggctcatgaccctgacgaaaggctgg
aggctttggaaagagatgttcacgatcacaggcgactcgagcagcggggagagagaggtg
tccatggagaggttcaacacctctccggacgctaaagtgtttttcggatcgatcaaagca
tgtggagaagggatatcattggtgggtgcgtcaagggtgctgattcttgacgttcatcta
aacccttcggtgactcagcaggctgtggctagagcttataggccggggcagaagaggaga
gtgtttgcgtacaggcttgtggctgcggattcgccggaggaggagagttttgagacgtgt
tcgaggaaggagatgatgtctaagatgtggtttgagtggaacattgagtgtggaggagga
agaagagatgagtttgggtttagggacgtggatgttgatcagtgtggtgatgtgtttctt
gagacgaccaagatgaaggaagatatcaagagtttatatactaggtga
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