Brassica napus (rape): 106449102
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Entry
106449102 CDS
T04128
Name
(RefSeq) citrate synthase 5, mitochondrial
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106449102
00630 Glyoxylate and dicarboxylate metabolism
106449102
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
106449102
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
PHY
Motif
Other DBs
NCBI-GeneID:
106449102
NCBI-ProteinID:
XP_048634272
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Position
A4:complement(1116545..1120423)
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AA seq
472 aa
AA seq
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MVFLRSVSAISRLRSRVAKQSSVSNSVRWLQTQGSSELDLKSQLQEIIPEQQDRLKKLKS
QHGTVPVGNITVDMVLGGMRGMTGLLWETSLLDAEEGIRFRGMSIPECQKVLPAAQPGGE
PLPEGLLWLLLTGKVPNKEQVDALSKELASRAAVPDYVYKAINALPLTAHPMTQFASGVM
ALQVESEFQKAYEEGVVHKSKFWEPTFEDALNLIARVPVVASYVYRRMFKDGSIIPLDDS
LDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLAFAAAL
NGLAGPLHGLANQEVLLWIKSVVEECGENISKEQLKDYVWKTLNSGKVVPGYGHGVLRKT
DPRYVCQREFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYG
LTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVNMDWLDKFMSLSR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcttaggagcgtctcggccatttcaaggcttcgatctcgagtcgcgaagcaa
tcttcagttagcaactccgttagatggcttcagacgcaaggctcttccgaattggacctg
aagtctcagctgcaagagatcattccagaacaacaggaccgcttgaagaaattgaaatca
caacatggaactgtcccagttgggaacatcactgttgatatggtacttggtggaatgaga
gggatgactggtttactctgggaaacctcactgcttgatgcagaagaggggatacgtttt
agaggcatgtcgattcctgaatgccagaaagtattgcctgcagctcagcctggaggagag
cccttgcctgagggtcttctgtggcttctgttaactggaaaggtgccaaacaaagagcag
gttgatgcattgtcaaaggagctagctagccgtgctgctgtgccagattatgtctacaaa
gctatcaatgctttgcctttgactgctcatccaatgactcaatttgcaagtggtgttatg
gctctccaggttgaaagtgaattccagaaggcatatgaggagggtgttgttcataagtca
aagttctgggagccaacctttgaggatgccctcaacttgatagctcgtgttcctgttgta
gcttcatatgtttatcggaggatgtttaaagatggtagcatcattccattagatgattct
ttggattatggtgctaatttttcacacatgctgggatttgatagtcctcagatgaaagag
ctcatgaggctttatgtcaccattcacagtgatcatgagggtggaaacgttagtgctcac
gctggtcacttggttgggagtgcactttcagatccatatcttgcatttgcagctgcctta
aatggtttagctggaccactacacggtttggcgaatcaggaagttttgctatggatcaaa
tcagttgttgaggaatgtggggaaaatatatcaaaggaacagctgaaagattatgtctgg
aaaaccttaaacagtggcaaggtagttccaggatatggccatggtgttttgcgtaagaca
gatccaagatatgtatgccaaagagagttcgccttgaagcatctacctgatgaccctctt
tttcagctggtgtctaagctctatgaagttgtgcctcctattttaaccgagctaggaaag
gttaagaacccttggcctaacgttgatgctcatagtggagtgctgctcaactattatggt
ctaaccgaagcaagatactacacggttctttttggcgtctcaaggagtcttggaatctgc
tcacagctgatatgggatcgagctcttggactgccacttgagagaccgaagagtgttaac
atggactggctcgataagttcatgagcttgagccgctga
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