Brassica napus (rape): 106449539
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Entry
106449539 CDS
T04128
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
bna
Brassica napus (rape)
Pathway
bna00531
Glycosaminoglycan degradation
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106449539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bna00536
]
106449539
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
106449539
Glycosaminoglycan binding proteins [BR:
bna00536
]
Heparan sulfate / Heparin
Enzymes
106449539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
106449539
NCBI-ProteinID:
XP_013746742
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All DBs
Position
C8:16048690..16051653
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AA seq
536 aa
AA seq
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MGCRQLSMIVLFLWVFQFPDKTVVSSAVEEKGTVFVYGRAAVGTVDEDFICATLDWWPPQ
KCDYGTCAWDHASILNLDLNNTIFQNAIREFAPLKIRIGGTLQDLVIYETPDQKQPCLPF
TQNTSLLFGYTQGCLPMRRWNQLNDFFSKTGAKVIFGLNALSGRSIQSNGEAVGAWDYTN
AESFIRYIVQNNHTVDGWELGNELCGSGVGTRVAASQYATDTIALRNIVNRVYRDGSPMP
LVIGPGGFFDAAWFTEYLNKAENSLNATTRHIYNLGPGVDQHLIEKILNPSYLDQEAITF
RSLKNIINNSSTKAVAWVGEAGGAYNSGRNLVSNAFVYSFWYLDQLGMASVYDTKTYCRQ
SLIGGNYGLLNTTNFTPNPDYYSALIWRRLMGRKALFTSFSGTKKIRSYTHCARQSKGIT
VLLMNLDNTTTVVANVELNNTYKLRHRKTSQKIARTSQMPWVSDGETQREEYHLTAKDGN
LHSQTMLLNGHALQVNSIGDIPPLEPIHVNSTDPITIAPYSIVFVHMPNVVVPACA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtcgtcaattatcgatgatagttttattcctttgggtgttccagtttccggac
aagaccgtcgtaagctcggccgtagaagagaaaggaacggtgtttgtgtacggaagagcg
gccgtgggaacagtagacgaagacttcatctgcgccactttggattggtggccacctcag
aaatgtgactacggaacttgtgcttgggaccatgcttcgattcttaacctggacctgaat
aacactatttttcagaatgcaatcagagaatttgctccattgaaaataagaataggagga
acattacaagacttggtgatatatgagacaccagatcagaaacagccttgtcttcctttc
acccaaaacacttcccttctctttggctacacacaaggatgtctgcccatgcgccgatgg
aaccagcttaatgacttctttagcaaaaccggagctaaagtcatcttcgggctgaatgca
ctctctggtcggagcatacaatctaatggcgaagccgtcggagcctgggattacaccaat
gctgaatcattcatccgatatatagtacagaacaaccacacggtcgatggttgggagctc
ggaaatgagctgtgtggaagtggtgttggtacaagagttgcagcaagtcagtatgctacg
gacaccatagctctgcgaaacattgtgaaccgggtttatagggatgggagtcccatgcca
ctggtgataggtcctggtggtttctttgacgctgcttggttcacagaatacttgaacaaa
gctgaaaattctctcaatgcaactactcgtcacatctacaatctcggtccaggggtggac
cagcatctgatagaaaagattctaaacccttcgtacctggaccaagaggcaataacgttt
cgcagcctaaagaacataatcaacaactcctcaacaaaggctgtggcatgggttggtgag
gctggtggcgcttacaatagcggtcgtaatcttgtctctaatgctttcgtttatagtttc
tggtacctggaccagcttggtatggcatcagtttatgatacaaaaacttattgtagacag
tctctgatcggaggaaactatggcctgctaaatactactaatttcactcctaaccctgac
tattacagtgctctgatctggcgacgacttatgggaagaaaggcattgttcacaagcttt
tccggaaccaaaaagatacgttcatacacccattgtgcaagacaatcgaaagggatcaca
gttttactgatgaaccttgacaacactacaacagttgtggcgaacgtagagctaaataac
acttacaaactaagacacaggaagacgtctcagaaaatagcaaggacttcccagatgcct
tgggtctctgatggtgaaacccaaagagaagagtaccatttgacagcaaaggacggaaat
ttacacagccagactatgctactcaacggtcatgcactgcaggttaactcgataggtgac
atacctccactggaaccgatacatgtaaactcaacagatccaataacaatagctccatat
tctattgtgtttgtgcatatgcccaacgttgttgtacctgcatgtgcttag
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