Brassica napus (rape): 106449893
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Entry
106449893 CDS
T04128
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106449893
03410 Base excision repair
106449893
03420 Nucleotide excision repair
106449893
03430 Mismatch repair
106449893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106449893
03036 Chromosome and associated proteins [BR:
bna03036
]
106449893
03400 DNA repair and recombination proteins [BR:
bna03400
]
106449893
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106449893
DNA Replication Termination Factors
ELG1-RFC complex
106449893
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106449893
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106449893
Check point factors
HRAD17(Rad24)-RFC complex
106449893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
Mg_chelatase
RuvB_N
AAA_11
AAA_16
AAA_5
ResIII
AAA_14
DEAD
AAA_24
SLFN-g3_helicase
nSTAND3
PhoH
AAA_28
AAA_7
AAA_assoc_2
AAA_19
Parvo_NS1
RNA_helicase
AAA_30
NPHP3_N
AAA_25
AAA_2
DUF815
IstB_IS21
TIP49
AAA_18
NB-ARC
bpMoxR
Motif
Other DBs
NCBI-GeneID:
106449893
NCBI-ProteinID:
XP_048622461
LinkDB
All DBs
Position
C8:30630354..30638747
Genome browser
AA seq
340 aa
AA seq
DB search
MAPVLESSTQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTA
LAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNNRPGGYPCPSFKII
ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM
SNRIMHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSGARLFGSTITSKDLLDVSGV
VPLEVVGRFFTACKSGDFDIANKEVDNIVAEGYPASQITNQLFHIIVEAGDDITDNQKAK
ICKCLAETDKRLVDGADEYLQLLDVASNTIRALSEMAQDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttctagagagcagcacacagccatgggttgagaaataccggccgaggcag
gtgaaggacgtggcgcatcaggaggaggtggttcgtgtcctcaccaacactctcgagact
gctaactgtccgcacatgctcttttacggaccgccaggaaccggaaagaccactactgca
cttgccatcgcccaccagctatttggacctgagttgtacaagtctagggtgttggagctg
aatgctagtgacgacagagggattaatgttgttcgcactaagatcaaggatttcgctgct
gttgctgttggctccaacaaccgtccaggcggttatccttgcccatcatttaagatcatt
attctcgatgaggctgattctatgaccgaagatgctcagaacgccttgaggcgcacaatg
gaaacttactccaaagtcacaagattctttttcatatgtaactatatcagcaggatcatt
gagccccttgcttcaagatgtgcaaagttcaggttcaaaccactttctgaagaagtcatg
agtaaccgtataatgcatatttgtaatgaagaaggtctcaaccttggtggagaggctctt
tcaacattgagctccatatcacaaggtgatctccgtagggccatcacgtatctgcagagt
ggtgctcggttgtttggatcaacaataacttctaaagatttactcgatgtgtctggggta
gttcctctggaggtagtcgggagattttttactgcatgcaaaagtggtgatttcgatatt
gcaaacaaggaagtggacaacatagttgcagaaggatatcctgcatctcaaatcaccaat
cagttatttcatataattgttgaggctggtgatgacataacagacaatcaaaaggctaag
atctgcaaatgtctagctgaaacagataagcgacttgtagatggtgcggatgaatatctg
cagcttttggacgtggcaagcaatacaattcgtgcactctcagaaatggctcaagacttc
taa
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