Brassica napus (rape): 106450067
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Entry
106450067 CDS
T04128
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106450067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106450067
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106450067
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106450067
NCBI-ProteinID:
XP_013747184
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Position
C1:32175741..32178247
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AA seq
486 aa
AA seq
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MATLEDSFLADLDDLSDNEAELDESDGDDAKKDEEDIDMDMADLETLNYDDLDSVSKLQK
SQRYLDIMHKVEEALGKESDGTEKGIVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRD
KYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTALTTKGSP
LPEDVLQKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQVLGHKRKNLAGFSSATSQLRVGYLEQTEIFQSTPPALKSRAGRILAAK
STLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRR
LRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISTVPSKLKI
NPTIAKKLKERNYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF
SKLKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttcctcgcagaccttgacgacttatctgacaatgaagca
gaactggatgagtctgatggtgatgatgcaaaaaaggatgaagaagatattgacatggac
atggctgacttagaaacccttaactacgatgatctcgattccgtttctaagctccagaaa
tctcagagatatctagacattatgcataaagtggaagaggctcttggaaaggaatctgat
ggaacggagaaaggaattgtgctagaagacgatcctgaatacaagctaatcgtggattgc
aaccagctctcagttgacattgagaacgagattgccatcgtccacaacttcatccgtgac
aagtacagactcaagtttcaagagcttgaatctctggtaaaccaccctattgactacgcc
cgcgttgtcaaaaagataggcaatgagactgatttaacactcgttgatcttgaaggcctg
cttccatctgctattatcatggttgtttcagtcactgccttgaccaccaaagggagccca
ctgccagaggatgtcctgcagaagactctagaggcttgtgatcgagctttagatcttgat
tccgcaaggaagaaggttcttgactttgtcgaaagcaagatgggatctatcgctccgaat
ctctccgctattgttgggagtgctgttgcggccaagctcatggggactgctggaggtttg
tcagcacttgcgaaaatgcctgcctgtaatgttcaagttcttggtcacaagaggaagaac
cttgccgggttctctagtgcaacgtcacagttacgtgtggggtatctggagcagacggag
attttccaaagcacgcctcccgcgcttaagagtcgcgctggcaggatcttggctgcaaaa
tctactttggcggcgagagttgatgctactagaggagacccgtcgggaacgaatgggaaa
gctttgagggaagagatacgtaagaagattgagaagtggcaagaacctcctcccgcaagg
cagcctaaaccgcttcccgttcctgattccgagcctaaaaaaagaagaggtggtcgccgt
ctaagaaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatg
gcctttggtacacccgaagagagctctcttggtgatgggttaggtgaaggatatgggatg
cttggccaggctgggagcaacaggctgcgtatatccactgttcccagcaagctcaagatt
aatcctaccatcgccaaaaagctgaaagaaagaaactatgcaggtggtgccactacctct
ggattgacatcgagtctggcttttactcctgtgcagggaatagagctgtgcaatcctcaa
caggctttagggttaggcagtgggactcaaagcacttacttttcagagtcagggaccttc
tctaagctcaagaagatataa
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