Brassica napus (rape): 106450401
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Entry
106450401 CDS
T04128
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106450401
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106450401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
106450401
NCBI-ProteinID:
XP_048637139
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All DBs
Position
A5:complement(170923..176563)
Genome browser
AA seq
1094 aa
AA seq
DB search
MEGAKRTRDQDQDDDNSGGGENQNQKQERSTSQDQKSPELDDDDFQETRPQSKRSRTLPS
HQNLIEVVKGKVDLIPKAVKIWVERYENSPNLATSELLSMLFQACGAKYSIKEDLLDETD
VDDVVVALVNLARSGEIEDYHTSRKKEHKNFKENLVSFWNCLITDSQNGPLFDKLLFDKC
MDFIIALSCTPPRVYRHTATLMGLQLVTSFISVANTLGSHRETTQRQLNAETKKRPDGPL
LHSLNKRLSLSHQHITTLEDMMRKIFTGLFVHRYRDVDPDIRMSCIQSLGIWISSYPSLF
LQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIEMADDVD
LSAAVCAIGLVKQLLRHQLIPDDDLGPLYDLLIDQPQEIRRAIGELVYDHLIAQKFNSSP
SGLTGHDDSSSEIHIFRMLQILREFSTDPILSVYVIDDVWEYMKAMKDWKCIISMLLDQN
PRTGSTTDEDSTNLVRLLFASIRKAVGEKIIPSTDNRKQYHSKAQREMFENNRKDITVAM
MKNYPQLLRKFMADKAKVSSLVEIVMFMKLELYSLKRQEQSFKAAVRLIKDAFFMNGEKE
ALRSCVKAITFCASESKGELQDFSRGKLKDLEDTLFDKLTSAIKEVKDGNDEYSLLVNLK
RLYELQLLKPVLGESMYDELAMTLHDFRNLDEEVICFLLLNMHMYVVWSLHSVVNCETVS
EASLSSLISKRDILFAELTYFLNGVEESRKYGNQLALRICALLAEEWCLFRKSTFESSKL
EMLGYCPESVILKKFWKLCEEIFNTSDETDEEDENKEYVAETNRDVAAIAACKLVNCGVV
PKDYLGPEIISHLVMHGPSVTEVIKNLITCLRKTEDDISSIYMESLKRGYQRYESELSCD
GGESRVEKCLQVCRELAGRLSGMYVGAARNKHRLEILSVVKEGVEFAFRDAPKQMLFLEV
AILPFATRLSVPDIIDIKREVQGRIVHVNTDEDPSGWRPCFTFLETLEEKCLKTEDVQDD
KEGVAVKRKGRPKKRAETERKRLFDEESGSDEDESISGGSDKEDKGDFVDEDAPLIETIR
SAARRRALRGERSK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgctaaaaggacaagagatcaggatcaggatgacgacaacagcggcggcgga
gagaatcagaatcagaaacaggagcggagcaccagccaagaccagaagagccctgagctc
gatgatgacgatttccaggaaacccgtcctcagtccaagcgcagtcgcacccttccttcc
catcagaatctcatagaggttgtgaaagggaaggtggatcttattcctaaagccgtcaag
atctgggttgaaagatatgaaaactctcctaaccttgctacctctgaactcttgtccatg
ctctttcaggcttgcggtgctaaatactccatcaaggaagacctgcttgatgagactgac
gtcgatgatgttgtcgttgcccttgttaatcttgctagatccggggaaattgaagattat
catacttctagaaagaaggaacacaagaacttcaaagaaaatcttgtttctttctggaat
tgcttaattaccgactcccagaatggacccttgtttgataaactcttgtttgacaagtgc
atggacttcattatcgcactctcatgtactccacctcgagtttaccgccatactgccacg
cttatgggtctccaacttgtcacttcctttatttctgttgccaacactctcggttcccac
cgtgaaaccacccaaaggcaattgaatgctgaaaccaagaaaagacctgacggccctctt
cttcactccctcaacaaaaggttgtctctttctcaccaacacattactactttggaggac
atgatgcgcaaaattttcactgggttgtttgtacaccgatatcgagatgttgaccccgat
attaggatgtcttgcattcagtctctgggcatttggatctcttcttatccttctcttttc
ttacaagatctctacttaaagtatcttggatggacgcttaatgacaaagctgccggagtg
aggaaagcttctctcctcgcattgcgaaaactttatgagatggatgaaaacgtccccact
cttggtctattcactgagagattttccaatcgaatgatcgagatggctgatgatgttgat
ttgtctgcagctgtctgtgctatagggcttgtaaagcagttgctaagacaccagctgatt
cctgatgacgaccttggccctttgtacgatttacttattgatcaaccccaggaaattaga
cgtgccattggagagttagtgtatgaccacttgatcgcacaaaagttcaacagttctcca
tccggtcttacaggtcatgatgattcttcctctgagatccatatcttcagaatgttacaa
atattacgggagttttccacagatccaatcttaagcgtttatgtaattgatgatgtttgg
gagtacatgaaggccatgaaggactggaagtgtatcatctctatgcttttggatcagaat
cctcggactgggtctactactgacgaagactcaacaaacttggtcagacttctgtttgcg
tcaatcagaaaggctgtcggagagaagataatcccttcaacggataatcgaaagcagtat
cacagtaaagctcagcgagaaatgtttgaaaacaacaggaaagatataacggttgcaatg
atgaagaactatccacaacttctacgtaaattcatggctgacaaagcgaaagtgtcatct
ctggtggagattgttatgtttatgaaactcgagctctattctcttaaacgacaggagcag
agttttaaggccgccgtccgattaattaaggatgcgtttttcatgaacggggagaaggaa
gcactaagatcttgcgttaaggctataacattttgtgcgtcggaaagtaaaggggaactt
caagatttttcccgtgggaagcttaaagatcttgaagatacgcttttcgataaactcact
tctgcaattaaagaagtcaaggatggaaatgatgaatactccctccttgtaaatctgaaa
aggttgtatgagcttcagttgttaaagcctgttcttggtgagagcatgtacgatgagctt
gctatgacactccatgatttcagaaatttggacgaagaggttatctgttttctcctcctg
aacatgcatatgtacgtggtgtggtctctgcactccgtcgtaaattgtgaaactgtctcc
gaagcttccttatcttcccttatatcaaaacgcgatatcctgtttgcggagcttacttac
ttcctaaatggagttgaggaatcgagaaaatatggtaatcagctagctctcaggatttgt
gctttacttgcggaagagtggtgtctttttagaaagtcaacttttgagtctagtaaactt
gaaatgttaggatattgtccagagagtgttattctcaagaaattttggaaactctgtgaa
gaaatttttaacacatcagatgagacggatgaggaggatgaaaataaggagtatgttgct
gagacgaacagagatgttgcagccattgctgcctgcaagttggttaattgtggtgtggtg
ccgaaggactatctaggaccagagataatatctcatcttgttatgcatggacctagtgtt
acagaagtcataaagaatcttataacatgcttaaggaaaacagaagatgacatctccagt
atctatatggaatccttgaaaaggggatatcaacggtatgaaagcgaactttcttgtgac
ggtggagaatcaagagtggaaaaatgtcttcaagtgtgccgggagcttgctggtcggcta
tcaggaatgtatgttggtgctgctcgcaacaaacacagactggagattttgagcgtggtc
aaggaaggtgttgagtttgcatttagggacgcaccgaaacaaatgttgtttctggaagtt
gctatccttccatttgcaacgagactctcagtgccggacatcattgacattaagagggag
gttcaggggcgtatagtgcatgttaatacagatgaagaccccagcggatggcgtccttgc
tttaccttcttagaaacattggaggagaaatgcttaaaaaccgaggatgtacaagacgac
aaggaaggagtagctgtaaaacgaaagggacgtcccaaaaaacgtgctgaaacagagcga
aagagactgtttgatgaggaaagtggaagcgatgaggatgaatccatcagtggtggctcg
gacaaagaagacaagggagattttgtagacgaggacgctcctcttattgagacaatcagg
tcggctgcaagacggagggcactaagaggcgaacggtccaagtga
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