Brassica napus (rape): 106450744
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Entry
106450744 CDS
T04128
Name
(RefSeq) CSC1-like protein At1g11960
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106450744
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106450744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
DUF4874
Motif
Other DBs
NCBI-GeneID:
106450744
NCBI-ProteinID:
XP_013747933
UniProt:
A0A078GZN8
A0ABQ7ZB86
LinkDB
All DBs
Position
C5:6104065..6108538
Genome browser
AA seq
768 aa
AA seq
DB search
MATLGDIGVAATINIITAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK
FVNVNLGSYLRFLNWMPAALKMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIALLAWSIL
VPVNWTSDGLQLAKLRNVTSSDIDKLSISNIERGSERFWTHLVMAYAFTFWTCYVLMKEY
EKVASMRLSFLQSEQRRPDQFTVLVRNVPSDPDESISESVEHYFLVNHPDHYLTHQVVYN
ANDLADLVEKKRSTQNWLDYNQLKYTRNQDQRPRIKTGFLGLWGEKVDAIDHYVAEIEKL
NDQIMEERKKVKKDDKSVMPAAFVSFKTRWGAAVCAQTQQSRNPTEWLTEWAPEAREVFW
SNLAIPYVSLTVRRLIMHVAFFFLTFFFMIPIAFVQSLASIEGIEKSASFLKPIIENDLV
KSVIQGFLPGIVLKLFIIFLPSILMVMSKFEGFVSLSSLERRAAFRYYIFNLVNVFLGSI
ITGSAFEQLDSFLKQSANQIPRTVGVAIPIKATFFITYIMVDGWAGVAGEILRLKPLIFF
HVKNFFLVKTEKDREEAMNPGQINFHATEPRIQLYFLLGLVYAPVTPVLLPFIIIFFALA
YLVFRHQIINVYNQEYESAGRFWPDVHGRIISALIISQVLLLGLMSTKGAAQSTPFLVAL
PVLTFFFHRFCKGRYEPAFLRHPLQEAMIKDTLEQAREPNFNLKPYLKKAYIHPVFKDDE
YEDVRSEVSGYYLGDTDDECVTVPTKRQSRITTPAASHASGGSMRSPS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactaggagatattggagtagccgcaacgatcaacataatcactgccatcatc
ttcctgttggcgtttgcaattttaaggatccaacctttcaacgacagagtttattttccc
aaatggtatctcaaaggtataagaagcagcccgttgcattcaggtgctcttgtcagcaag
tttgtcaatgtaaacttaggctcctacctgcgtttcttgaactggatgcccgctgctctg
aagatgcccgagcctgagcttattgatcatgccggcttggattctgctgtctacttgagg
atttacttgatagggcttaaaatctttgtaccgatagcattacttgcatggtcgattctt
gtacctgtgaattggacaagcgacgggctgcaactagcgaagctacgtaacgtaacatct
agtgatattgataagttatcaatctctaatatcgaacgtggatcagagaggttttggact
catctcgtgatggcttatgccttcacattctggacttgttatgttctaatgaaagagtat
gagaaagtagcttctatgcgtttatcatttctccagtccgagcaaaggcgtcctgatcaa
ttcacggttttggtaaggaatgtaccatcggatccagatgagtccattagtgagagtgtg
gagcattacttccttgttaaccatccagaccattatcttacacatcaggttgtgtacaat
gcaaacgatttggcggatttagtagagaagaagaggagcacacagaactggcttgactat
aaccagttaaaatatacaaggaaccaggatcaaagaccaaggataaagacagggtttctc
gggctatggggagagaaagttgacgccattgatcattacgtagctgagatcgagaaacta
aacgaccaaataatggaggaacggaagaaggtaaagaaagatgacaagagcgtaatgcca
gcagcttttgtctcatttaaaacacgttggggtgctgcggtttgtgcacagacacaacag
tctagaaacccgaccgaatggttaactgaatgggctcccgaggcacgagaggtgttttgg
tcaaacctcgcgattccttatgtttctttaacagtgagaagacttataatgcacgttgcc
ttcttcttcctcactttcttcttcatgatcccaatagcctttgttcagtccttagcaagt
atcgaaggcatagagaaatctgcttctttcctcaaacccatcatagagaatgatcttgtt
aaatcggttatccaaggttttcttcctgggatcgtgttaaagctctttataatatttctg
ccaagcattttgatggtcatgtccaagttcgaaggttttgtatcgctatcatcgttagag
agaagagctgcttttcgttattacatcttcaacctcgtcaatgtcttcctcggtagcatt
atcaccggttctgcttttgaacagcttgattctttccttaaacaatccgcaaatcagatc
cctaggacggttggagtagctataccgataaaagcaacgtttttcataacatatataatg
gtggatggttgggcgggagttgcgggggagatcctgaggctgaaacctttaatctttttc
catgtaaagaacttctttttggtgaaaactgaaaaggatagagaagaagctatgaaccct
ggacagatcaacttccacgcgacagagcctaggattcaactctacttccttctcggtctt
gtctatgccccggtcactcctgttctactccctttcattataatcttcttcgcattggct
tacctcgtctttcgtcatcagatcataaatgtgtacaatcaagaatacgaaagcgcgggt
aggttctggcctgatgttcatggacgtataatatcggcgttgatcatctcacaagttctt
ttactaggactaatgagcactaaaggagctgctcagtccactcctttcctcgtcgcctta
ccggttctcacctttttctttcaccggttctgcaaaggccggtacgaaccggcatttctc
cgccaccccttgcaggaagctatgatcaaagatacattggaacaagccagagaaccgaac
tttaacttgaaaccttatcttaagaaggcatatatacatccggtttttaaagacgatgaa
tatgaagatgttcggtctgaggtttccggttattacctcggagatacggacgatgaatgt
gttaccgtgccgaccaaacgtcagtctcggataactacgccggctgctagtcatgctagc
ggcggttctatgcgttcaccatcgtag
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