Brassica napus (rape): 106450894
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Entry
106450894 CDS
T04128
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106450894
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106450894
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
106450894
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106450894
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106450894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
AAA_22
NPHP3_N
AAA_16
AAA_14
TIP49
Mg_chelatase
AAA_2
DUF815
nSTAND3
RNA_helicase
IstB_IS21
AAA_25
ABC_tran
AAA_24
AAA_33
NACHT
DUF4368
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
106450894
NCBI-ProteinID:
XP_013748140
LinkDB
All DBs
Position
A5:complement(2878159..2882363)
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AA seq
488 aa
AA seq
DB search
MSFFRGIIDSFSSIFTVESNHDPTVSSSSSSASSMNVIDGAPVSNERVAYKLKGYFDLAK
EEIAKGVRAEEWGLHDDALLHYRNAQRIMSEATSTPSPSYISSNEKEKVRSYREKISKWQ
SQVSERLQALGKRAGVGMSENKRTVPSPSSASVSSNRRVSTQRTSLPRGGVGKARSPRDA
TTTNLKPAKESGNGYDDKLEEMINTTIVDRSPSVKWDDVAGLDGAKQALLEMVILPAKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKT
LFQVAISRQPSVIFMDEIDSIMSTRSTNENEASRRLKSEFLIQFDGVTSNPDDLVIVIGA
TNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSGGDIDKIVRETEGYS
GSDLQALCEEAAMMPIRELGADILTIQANKVRPLRYDDFRKSMAVIRPSLSKSKWEELER
WNSEFGSN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcagaggtataattgattcgtttagctcaatcttcaccgtagaatctaat
cacgatcctaccgtatcatcttcttcttcatctgcctcctccatgaacgttatcgatgga
gctccggttagtaacgaacgtgtcgcgtataagctcaaaggatacttcgatttggcgaaa
gaggagatcgccaaaggtgttagagcagaagagtggggtttacatgacgacgcgcttctt
cattacagaaacgcccagaggatcatgagtgaagctacctccacgccttctccttcttac
atcagttccaatgagaaggagaaggtgagatcttatagagagaagatttctaaatggcaa
agtcaagtatctgagaggttgcaagctcttggtaaacgtgcaggtgttggaatgtctgag
aataagagaactgtaccatctccttcttcagcttcagtttcctctaatagaagagtttca
acacaaaggacttcacttcccagaggtggagttgggaaggcgaggagccctagagatgct
actactacaaacctaaaacctgcgaaagaatctgggaatggatacgatgataagttagaa
gagatgatcaacacaacaatagtggacagaagtccatctgtcaagtgggatgatgttgct
ggacttgatggagctaaacaagctttactggagatggttattttaccagcgaaacgaaga
gatttgttcactggtctccgaagaccagctagaggtttgcttctctttgggccacctgga
aatggaaaaacaatgcttgccaaggcagttgcttctgagtcacaggcaacattcttcaac
gtctcagcatcttcattgacatctaaatgggtgggtgaggctgagaagctagttaaaacg
ttgttccaagttgcaatatctagacaaccttctgtgatatttatggatgaaatagatagt
ataatgtctacaaggtctaccaatgagaacgaagcaagcagaaggttgaaatcagagttc
cttatccaatttgatggtgtgacttctaatcctgatgatctggtgattgtcattggagct
actaacaagccacaggagttggatgatgcagtgcttagaagattggtaaagagaatatat
gtaccgttgccggattcaaacgtcaggaaactactttttaaaactaaactgaagtgccag
cctcactctttatctggtggagacattgataaaatcgtcagagaaaccgaaggatactca
ggaagtgatctacaagcattgtgtgaagaagctgcaatgatgccaatcagagaactcggt
gctgatattctcaccatccaagcaaataaagtgagaccgctgagatatgatgattttagg
aaatcgatggcagtgataagaccaagcttgagtaaaagcaaatgggaagagcttgaacgt
tggaactctgagtttggctctaattga
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