Brassica napus (rape): 106451381
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Entry
106451381 CDS
T04128
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106451381
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106451381
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106451381
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
106451381
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106451381
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106451381
Prokaryotic type
106451381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
DALR_2
tRNA-synt_1f
HisKA
Motif
Other DBs
NCBI-GeneID:
106451381
NCBI-ProteinID:
XP_013748761
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All DBs
Position
A5:complement(7387434..7390354)
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AA seq
552 aa
AA seq
DB search
MASLLNLFKSCRPFTPIQLPSRLRPGKLTQPRRSFTPLSSSSTYKGDSTPSVKDLWLHNT
MSRKKELFKPKVEGQVGMYVCGVTAYDLSHIGHARVYVTFDVLFRYLKHLGYQVSYVRNF
TDVDDKIIARANELGEDPISLSRRFCKEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLINQ
IIDNGYAYEVDGDVYFSVDKSPTYGKLSGRKLEDNRAGERVAVDTRKRHPADFALWKTAK
EGEVSWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDS
SDISYWVHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFL
LESASERVFYIYQTLHDCESVLGEKDSTFDNGSVPSDTLTSINTFRSEFIASMSDDLLTP
VTLAAMSEPLKTINDLIHTRKGKKQPRREESLKALEASVREVLTILGLMPTSYSEVLEQL
KEKALKRAGLNEEDVLQRVKERTEARKNKEYERSDEIRKELANVGIALMDSPEGTAWRPA
IPLALQEPSTTT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcttctcaatctcttcaaatcatgtagaccctttactccaattcaactccct
tcccgtctcagacccggaaagctaactcaaccccgtcgctctttcacccctctctcatca
tcatcaacatacaaaggagattccactcccagcgtaaaggacctttggctgcacaacacg
atgagcaggaagaaagagctgttcaagcccaaggtcgaaggccaagttgggatgtacgtt
tgcggcgtcactgcttacgatctcagccacattggtcacgctcgcgtctacgtcaccttc
gatgttctcttcaggtaccttaagcatctaggttatcaagtctcttatgttcgaaacttc
actgacgttgatgataagataattgccagagccaatgagttaggggaagatccaatcagt
ttgagcagacgtttctgcaaggagtttaatcgagatatggaacagcttcagtgtttagat
ccttctgtccagccacgcgtctctgatcatatacctcagatcatcgacctgatcaaccag
attattgataatggctatgcctacgaagttgatggagacgtatacttctcagtcgacaag
tccccaacgtacggaaaattgtctgggagaaagttagaagacaaccgtgcaggcgagaga
gtggcggttgacacaaggaagagacatcctgcagattttgctctctggaagactgcaaaa
gaaggggaggtgtcttgggagagtccttggggaagaggaaggcctggttggcacatagag
tgcagcgcgatgagcgcggcttatctaggctatagttttgacatacatggtggagggatg
gatcttgtgttccctcaccatgaaaatgaaattgcccagagctgtgctgcttgtgatagc
agtgacattagctattgggtacataatggttttgttactgttgactcagagaagatgtct
aaatctttggggaacttcttcactatcagacaggttatagatctttatcatcctttagct
ctgagactgtttctaatgggaactcattatcggtctcctatcaattactctgacttcctc
ctcgagagtgcttctgaacgtgttttttatatctatcagacgttacacgactgtgaaagc
gttttaggcgagaaagattcaacgtttgacaatggttcagttccttcagacactttgaca
agcatcaacactttccgcagtgaattcattgcctcaatgtcggatgatcttcttactcct
gtaactctggctgcaatgtcagaaccattgaaaaccatcaacgatctcattcacacccga
aaggggaaaaaacaaccaagaagagaagagtcacttaaggctctagaggcatcagtcaga
gaagttcttactattttggggcttatgcccacaagttactcagaggttcttgagcagcta
aaagagaaggcactaaagcgagctggactgaatgaggaagatgtgttgcagagagtgaag
gagaggacagaggcaaggaagaataaagaatatgaaagatctgatgaaattaggaaagag
ttggcaaatgttgggattgctttgatggatagtcctgagggaacagcttggagaccagcc
attcctcttgcccttcaagaaccttcaactacaacttga
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