Brassica napus (rape): 106451405
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Entry
106451405 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106451405
00071 Fatty acid degradation
106451405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106451405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106451405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106451405
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106451405
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106451405
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106451405
Exosomal proteins of breast cancer cells
106451405
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
106451405
NCBI-ProteinID:
XP_013748820
LinkDB
All DBs
Position
C4:62676249..62681771
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AA seq
660 aa
AA seq
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MKSFAAKVEDGVRGENGKPSVGPVYRNLLSEKGFPPIDSDITTAWDIFSKSVKKFPDNKM
LGWRRIVDEKVGPYMWKTYKEAYDEVLQIGSALRAIGAEPGCRVGIYGVNCPQWIITMEA
CAAHTLICVPLYDTLGSGAVDYIVDQAEIDFVFVQETKIKGLLEPDCKCARRLKAIVSFT
NVSEEHNLKGSEVGVKTYSWLDFLQMGCGKPEETTPPKPFNICTIMYTSGTSGDPKGVVL
THEAVATYIVGMDLFMDQFEDKMTHEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYHGD
LNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYKHKLAWLNRGY
SHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSTEIEEFLRVTCCCFVVQGYGLTET
LGGTAMGFPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIRGKCLFSGYY
KNPKLTQEVMKDGWFHTGDIGEIQSNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQNS
LVQDIWVYGDSFKSMLVAVIVPNQETIKRWAKELGFTKPFEELCSLSELQEHIISELKST
AEKNKLRKFEYIKAVTVETKPFDVARDLVTATLKNRRNNLLKYYQVQVDEMYRKLASKKI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcgcggcgaaggtggaagatggagtgagaggggaaaacgggaagccgtcg
gtaggtccggtataccggaatcttttgtcggaaaaaggttttcctccaatagattctgat
atcaccactgcttgggacattttcagtaaatcagtcaagaaattccctgacaacaagatg
cttggatggcgtcgaatcgtcgatgagaaggttggaccgtatatgtggaaaacttacaag
gaagcatacgatgaagttctgcagattggctctgcattacgtgctattggagctgagcct
gggtgtcgagtggggatctatggagttaattgtcctcagtggatcataacaatggaggca
tgtgcggctcacactctaatctgtgtacctctatatgataccttgggttctggagcagtg
gattatatcgttgatcaggcggaaatcgattttgtattcgtccaagagaccaagattaaa
gggcttcttgagccagactgcaaatgtgctagacggctaaaagccatagtttccttcact
aatgtgagcgaagagcataacctcaagggttcagaagttggagtcaaaacatactcttgg
ctcgattttctccaaatgggatgtgggaaaccggaagagactaccccgcctaagccgttt
aatatatgcaccataatgtataccagcggcacgagtggtgaccctaaaggtgtggttttg
actcatgaagctgtggccacttacattgttggcatggatcttttcatggaccagttcgaa
gacaagatgacacatgaagatgtgtatctctctttcttgccgctggctcatattcttgac
cgtatgaatgaagaatacttctttcgcaaaggggcctccgttggctattaccatggagat
ttgaatgtgctacgcgatgacattcaagaattgaaaccaacttatctagctggagttcca
agagtgtttgagagaatccacgagggtattcaaaaggctcttcaggaacttaacccgaga
aggagatttatcttcaatgctctctacaagcacaagcttgcatggttaaatcgtggatat
tctcatagcaaagcttcacccatggctgatttcatagccttccgaaagattagagacaaa
ctgggaggtcgaatccggttgctagtatctggaggagcacctttgagcacagagattgag
gagttcctgagagttacttgctgttgctttgtcgtccaaggctacggtctgacggagacg
cttggaggaacagctatgggcttcccggacgagatgtgtatgctagggacagtcggtatt
ccggcggtttacaacgagatacggcttgaggaagtggctgaaatgggctacgacccactt
ggggaaaatccggcaggcgagatctgtataagaggaaaatgtttgttttctggttattac
aagaaccctaaacttactcaagaagtcatgaaagacggatggttccatacaggagatatt
ggtgagattcaatcaaatggagtacttaagataattgatcgtaagaagaatttgatcaaa
ctctctcaaggggagtacgttgctcttgagaacctggaaaacatctatggtcaaaactct
cttgtccaagatatatgggtttatggagacagcttcaaatcgatgcttgttgcggtgatt
gttccaaaccaagaaaccataaaacgttgggctaaagaacttggttttactaaaccattc
gaagaactatgttctctctcggagttgcaagagcacatcatttcagaactgaagtccacg
gcagagaagaacaagctaagaaagtttgagtacatcaaagcagtgacggtggagacaaaa
cctttcgatgtagcgagagacttagtgactgcaacgctcaagaaccggaggaacaacctg
ctcaagtattatcaggtacaagtcgacgagatgtacagaaaattggcgtcaaagaaaatc
tga
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