KEGG   Brassica napus (rape): 106451648
Entry
106451648         CDS       T04128                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106451648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106451648
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106451648
 Complex B
    106451648
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C Transformer RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 106451648
NCBI-ProteinID: XP_013749056
UniProt: A0A816XYZ1
LinkDB
Position
A1:20114820..20118539
AA seq 566 aa
MNYEGNGDSVTLATDDNNDKENYIARKSSPFKSRDSHDLDKDSSRSRDKDKDKEKGPDKD
RDRDRERDRHRRDRHRDRSRERSEKRERERDDLDDDDDDDDHYRSRHRHRSSRDRDREER
HRRRSRSRSRSRSERRSRSEHRRRSQHRSRSRSRSRSKSKRVSGFDMAPPASAMLAATAV
AAAAGQVPSVPATAGIPGMFPNMLAMVPGQQMGALPLLPMQAMTQQATRHARRVYVGGLP
PTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG
IILEGVPVKVRRPTDYNPSLAAALGPSQPNPSLNLAAVGLSSGSTGGLEGPDRIFVGGLP
YYFTEEQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVFQDPSVTDIACAALNGIKMGD
KTLTVRRAVQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGGTPTKIVCLTQVVTADDLGD
DEEYEDIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGAAKARSGMN
GRKFGGNQVVAVYYPENKFAQGDYEG
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgaattacgaaggtaacggagatagtgtcactctcgccaccgatgacaataacgacaag
gagaactacatagctaggaagagctcgccattcaagtctcgagattctcatgatctggat
aaggattcttcaagaagcagggacaaggacaaggacaaggaaaaggggcctgataaagac
agggacagagatagggaacgcgaccgccatcgtagagatcgtcatagggaccgtagcaga
gaacgtagtgagaaaagggaacgtgagagagatgatctcgatgatgatgatgatgacgat
gatcattacagaagtcgacaccgtcacagaagctctcgcgatcgagatagagaggagaga
cacaggcgacggtcacgctctcgctccaggagccgctctgaacgtaggtcaagatccgag
cataggcgtaggtctcaacatagatcacgttcacgctcacgctcacggtctaagagcaag
agggtaagtggattcgatatggcgccccctgcttctgcaatgttagctgctactgctgtt
gctgccgcagcaggccaggttcctagtgtgccagctactgctggtattccagggatgttc
cctaacatgcttgcaatggtccctggtcagcaaatgggcgcgcttcctttactgccaatg
caggcaatgactcagcaggcaactaggcatgctcgacgagtctatgttggtggccttcca
cctactgcaaatgaacagtcggttgcaactttctttagccaagtgatgtcggcgattggg
ggaaacactgctgggccaggtgatgcggtggtcaatgtttacataaaccatgaaaagaag
ttcgcttttgtggagatgagatccgttgaggaggctagtaatgcaatggcattagacgga
attatattagagggggttcctgtaaaggtgagaaggccaactgactataacccgtcgctt
gctgcagctcttggcccgagccagcctaatcccagtctcaatttggcggctgttggattg
tcttcggggtctactggtgggcttgagggtccggaccgcatttttgttggtgggcttcct
tattacttcacagaggaacagatcagggagctcttggagtcttttgggcccctgagaggt
tttaacttggttaaagacagggaaactggaaactccaagggatatgcgttttgtgttttc
caagatccttcagtgacagatattgcttgtgccgctctaaacgggattaagatgggtgat
aagacacttacagtgaggcgtgcagtccagggtgtgattcaacctaaacctgagcaagaa
gaagtattacttcatgctcaacagcagattgctttgcagaggcttatgctacaaccggga
ggcacgcccaccaagattgtatgtttgactcaagtggttacagctgatgatcttggagat
gatgaagaatatgaagacataatggaggacatgagacaagaaggtggaaaattcggtaac
ttggtgaatgttgtgattccgaggcccaatcctgatcatgatccaacaccaggagttgga
aaggttttcttagagtatgcggatgtagatggcgcagcaaaggccagatcgggaatgaat
ggaagaaaatttggaggaaaccaagtggttgctgtgtattaccccgagaacaagtttgca
caaggcgactacgaaggctga

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