Brassica napus (rape): 106451653
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Entry
106451653 CDS
T04128
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106451653
03410 Base excision repair
106451653
03420 Nucleotide excision repair
106451653
03440 Homologous recombination
106451653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106451653
03400 DNA repair and recombination proteins [BR:
bna03400
]
106451653
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106451653
DNA replication proteins [BR:
bna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
106451653
DNA repair and recombination proteins [BR:
bna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
106451653
NER (nucleotide excision repair)
GGR (global genome repair) factors
106451653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
106451653
NCBI-ProteinID:
XP_048635139
LinkDB
All DBs
Position
A5:complement(13716718..13721508)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAMGVSFTSHSNPLLRHLSPSPFSAFRSSFFLVPCRKTLQRRLASTEGSVGYSTSTVCHG
FQNPVHQRPSSVVFNGEWILLSEPNRARMVPKTNKVGNQTEVGETVNHQVPGTVSAWRDE
ANKFRARHGQVATRNLDDASYFNGSSIPVTPPSGRSSQKIDYGFKPRGNNSTSATLHKES
IGVMQSEPVVTSPNKNLEVGIGSDVDVRLQGDGKPKPLVSGKASGKASNVNPVTISKVEK
SNEPSKVRANLRRIYDKVVVVDTVPAARNVVAKLVDQYRNLVHSCDTEVSDIEVKDETPV
DHGRLICFSIYCGSDADFGNGKSCIWVDVLGENGKEVLAEFKPYFEDASIRKVWHNYSFD
SHIIRNHGIELSGFHADTMHMARLWDSARRTEGGYSLEALTSDPRVLGATQTKEEADFLG
KISMKTIFGKRKLKKDGTEGKIIVIPPVEELQREDREAWISYSALDAISTLKLYESMSKK
LQLKEWRLDGKLLSGRTMLDFYHEFWRPFGELLVKMEAEGILVDRDYLAEIEKVAKAEQQ
VAVSRFRNWASKYCPDAKYMNVGSDTQLRQLFFGGISNSENDEVLPVEKLFKIPNIDKII
EEGKKAPTKFRNIKLHRISDTPISTETFTASGWPSVSGVTLKTLAGKVSAEYDFMEDVTE
TSAEEDDDAQLLDQASEAQKAKTDVDTSAYGTAYAAFGGGERGKEACHAIASLCEVCSID
SLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRKAFV
AAPGNSLIVADYGQLELRILAHLAGCKSMMQAFKAGGDFHSRTAMNMYPHIRKAVENGEV
LLEWHPQPGQDKPPVPLLKDAFASERRKAKMLNFSIAYGKTATGLSRDWKVSREEAQETV
NLWYNDRQEVRKWQELRKKEAIKDGYVLTLLGRARRFPAYQSRAQKNHIQRAAINTPVQG
SAADVAMCAMLEITTNQRLKELGWKLLLQIHDEVILEGPMESAEMAKDIVVDCMAKPFNG
KNILSVDLSVDAKCAQNWYAAK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccatgggggtttccttcacctcccacagcaaccctctccttcgccacttatctcct
tcccctttctcggcttttcgttcttccttcttcctcgtgccttgccgtaaaacccttcaa
aggagattagcttccacagaagggagtgttgggtattcgacctccacagtttgtcatgga
ttccaaaacccggttcatcagcggccatcttctgttgtgttcaatggagagtggatactt
ctgtcggagcctaacagggcaaggatggttccaaagacgaacaaagttgggaaccagaca
gaagttggagaaaccgtgaaccatcaagttcctggaactgtaagtgcttggagggacgaa
gcaaataagtttagagcaagacatggccaagttgctactagaaacctcgatgatgcttct
tatttcaatggctcatccatcccagttactccacctagtggaagaagctctcagaagatt
gattatggattcaagcctagaggtaataacagtacttctgctacactccataaagaatcg
attggcgttatgcagtctgaacctgttgtgacgtcgccaaacaagaacttggaggttggg
attgggtcagatgtggatgtgaggcttcaaggagatggaaaaccaaaacctcttgtgagc
ggaaaggcctctggtaaagcaagcaatgtgaatccagttaccatttccaaagtggagaaa
agcaacgaaccatcgaaagtccgagcaaacctaaggagaatatatgacaaggttgttgtt
gttgatactgtgccggctgcgaggaatgtggtggctaagcttgtggatcaatacaggaat
cttgttcactcttgtgatacagaggtgtccgatattgaggtgaaggatgaaacacctgta
gaccatggcagactgatatgttttagtatctattgcgggtcagatgcagattttgggaat
ggaaaatcttgcatctgggtagatgttcttggtgaaaacggcaaagaggttttggccgag
tttaaaccttattttgaagacgcatccatcagaaaagtgtggcacaactacagctttgat
agccacattattagaaaccatggaattgagctttctggatttcatgctgacacaatgcac
atggcaagactgtgggattccgcgagacggacagagggtggttactcgcttgaagcgctt
acaagcgacccaagagttcttggggccacacagacaaaggaggaagcagatttcctcggc
aaaatttcgatgaagactatttttgggaagagaaagctgaagaaagacggaacagaaggg
aaaataattgtcatccctccggttgaagagcttcagcgagaagaccgagaggcttggata
tcgtactctgccttggatgcaataagcacgctgaagctttacgagagcatgtcaaagaaa
ctgcaactaaaagaatggcgtcttgatggaaagctactctcaggaaggacaatgttggac
ttttaccatgagttctggcgaccctttggtgagcttcttgtcaaaatggaagcggaaggg
atacttgtggatagggactacctggctgagattgagaaagtagccaaagcagagcagcaa
gtcgctgtgagtaggtttcgaaattgggcgtctaagtattgccccgatgcaaaatatatg
aacgttggcagtgacacacagttgcgtcagctcttctttggtggcatttctaacagtgag
aatgatgaggtgcttccggttgaaaagcttttcaaaattccaaacattgacaagattatt
gaagagggcaaaaaggcacctaccaagttcagaaacatcaagttgcataggatcagcgat
accccaatctcaactgaaacgttcactgccagtggttggccctctgttagtggggtcact
ttgaaaaccttggctgggaaagtttctgctgagtacgattttatggaggatgttacagag
actagtgcagaagaagatgatgatgctcagctactagatcaagcttcagaagcgcaaaag
gccaagacggatgttgacacgtctgcttatggaacagcatatgcagcgtttggagggggt
gaaaggggaaaggaggcctgtcatgctattgcctcattgtgtgaagtttgctccatagat
tcgttaatctcaaattttattcttccattacagggaagtaatgtatcaggcaaagatggt
cgagtccattgctccctgaatatcaatacagaaactggccgcttatcagctaggaggcca
aacttgcagaaccaacctgcgttggagaaggatcggtacaagattcgtaaggcctttgta
gcagcacctggaaattcacttattgtggctgactatgggcagctggaacttagaattctg
gcacatcttgctggttgtaaaagcatgatgcaagctttcaaagcaggtggagatttccac
tcgaggactgccatgaatatgtatccacatattcgtaaagctgtggaaaatggggaagtg
ctccttgagtggcatccgcaacctgggcaagacaagccgccagtacccttgttgaaggac
gcctttgcttctgagagaagaaaggctaagatgctcaacttttcaattgcatatgggaaa
accgcaactgggctttctagagattggaaggtctcaagagaagaagctcaggagacggtc
aatctatggtacaatgacagacaagaagtaaggaaatggcaagagttgcgtaagaaagaa
gctatcaaggatggttatgtactcactctcttaggaagggctcgtagattcccagcatat
cagtctcgtgcacagaagaatcatatccaaagagcagccatcaacactccagtgcaggga
agtgcagctgatgttgcaatgtgtgcaatgctggaaataacgacaaatcaacggttgaag
gagcttggttggaaattacttctacagattcacgatgaagtaatcttggaaggaccaatg
gagtcagcggaaatggccaaggatatagttgtggactgcatggctaaaccctttaacggc
aagaatatactctcagtagatttatcggttgatgcgaaatgtgctcagaactggtatgct
gctaaataa
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