Brassica napus (rape): 106451690
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Entry
106451690 CDS
T04128
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106451690
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106451690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
106451690
NCBI-ProteinID:
XP_013749105
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Position
A5:13216740..13221383
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AA seq
789 aa
AA seq
DB search
MGGSGVQVNKAHKARVSSKSSRNIHKTSLQDKGRISKPEGNHVKGAKAARLQRAKMVREQ
KRAAVLKEKRESGGLSSAPRVIVLFPLSASVDLNSLGEDVLKLLSTDGDVTSSSTVASSE
YKLRATVLKAPHGDLLTCMEMAKVADLIAFVASANEDISSLIDSFGSQCLSVLRSIGLPS
TAVLIRDLPSELKKKNKLKKMCASRLASEFPKDCNFDPADTRDELHQFMGLLKAQRLSIP
HWRKQRPYVVAQKVGMLVDDTTPGKCTLLLSGYLRARKLSVNQLVHVTGVGDFQLSKVEV
LKDPFPLLNERRKQTSMELDDSHDEEVLRSLVPDPMKQEPLVTENTPDPLEGEQTWPTEA
EMAEADSNQKQGKPKKRSLPLGTSEYQAAWIIDEIDEEDSDNGDSDDDRMVLDRGEDQYS
NQDQDFEDDKETLYVQDMDNETHNDSEMMDDENLTREQYEDQIKKIKEAHAEDEEFPDEV
ETPIDQPARKRFAKYRGLKSFRTSPWDPNESLPQDYARIFAFDNVARTQKLVLKQALKME
EEEEESRDDCVPTGSYVRLHIKEVPLVAASKLSSIVSTKPIIAFGLLQHESKMSVLRFSL
KKYDGYEDPIKTKEELMFHVGFRQFVARPVFSTDNISLDKQVMERFLHPGRFSLASVYGP
ISFPSLPLVVLKISDADAPAFAAFGSLKSIEPSKIVLKKIILTGYPQRVSKMKASVRYMF
HQPEDVRWFKPVEVWTKCGRRGRVKEPLGTHGAMKCIFNGVVQQHDVVCMNLYKRAYPKW
PERMYPQLL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggggctctggagttcaagtcaataaggctcacaaggctcgtgtctcctctaaatct
tctcgcaatatccacaaaacctccctccaagataaaggccggattagtaaaccggagggt
aaccacgttaaaggcgctaaagctgcccgtcttcagcgtgccaagatggttagagagcag
aaaagagcagcggttttgaaggagaagagggaatcaggaggcttatccagtgctcctcga
gttatcgtcttgtttcctctctctgcttccgtggatttgaactcgcttggtgaagatgtt
ttaaagctgttatctactgatggtgatgtcacttcttcttcaacagttgcatcatctgag
tataagctacgagcaacggttttgaaggcgcctcatggggatcttctgacatgcatggaa
atggccaaggttgctgatctgatcgcttttgttgcatctgcaaacgaggatatctctagc
ttgatagattcattcggaagtcagtgtctttctgtgcttagatcaattggtctgccaagt
accgctgtgttgatacgtgacttacccagtgagctgaaaaagaagaataagctgaaaaag
atgtgtgcctctcggcttgcttctgaatttcctaaggattgtaattttgatccagcagac
accagagatgagttgcatcagttcatgggattattgaaggcacaaaggctttctatacca
cactggcggaagcaacgaccttatgttgtggctcagaaggttgggatgctggtggatgat
acaaccccaggaaagtgcactctacttctctccggttacttgcgtgctcgtaaactatca
gtaaatcagctggtccatgttactggcgttggtgattttcagctctcaaaagttgaagtc
ctgaaggacccatttccattattaaatgaaaggagaaaacagacttccatggaattggat
gattcacatgatgaagaggtattgaggtctttggttcctgatcccatgaaacaagagcct
ttagtaactgaaaacactccagatccattagaaggggaacagacatggccaactgaggca
gagatggctgaggctgacagtaatcagaaacagggaaagccaaagaagaggagtttgcca
ctagggacttcagaatatcaggctgcttggattattgatgagatagatgaagaggattct
gataatggtgattccgatgacgatcgtatggtgttggatagaggagaggatcagtattcc
aatcaagaccaagattttgaggatgataaagaaacactgtacgtgcaggatatggataat
gaaactcataatgactcggagatgatggacgatgaaaacttgacaagagaacaatatgag
gatcaaatcaagaaaatcaaagaggcacatgctgaggatgaggaatttccagatgaggtg
gagactcccattgatcagcctgcaagaaaacgttttgcaaagtacaggggtctcaaatcc
ttcagaacctccccgtgggatccaaatgagtctctacctcaggactatgccagaatcttt
gcttttgataacgtcgctaggactcaaaagcttgtgctcaagcaagccctgaagatggaa
gaagaagaagaagaaagcagagatgattgtgtaccaactgggtcatatgtacggctgcat
attaaggaagtgcctcttgttgctgcctctaaactatcatccattgttagcacgaaaccc
attatagcatttgggcttttgcaacatgaatccaagatgtcggttctgcgctttagctta
aagaagtatgatggttacgaagatcctattaaaacaaaagaggagctaatgttccatgtt
ggtttccgtcagttcgttgcaaggccagtattttcaaccgacaatatcagtttagacaaa
caagtgatggagaggtttctgcatccaggccgtttctcattggcttcagtatacggccca
atatccttcccatcccttcctttggttgttctgaagatttctgacgctgatgctcctgct
tttgctgcctttggttccttgaaaagcattgaacccagcaaaatagttttaaagaagata
atattaactgggtatcctcagagagtatcaaaaatgaaagcatcagtaagatatatgttc
catcaacctgaagacgttagatggtttaagcctgtagaagtgtggacaaaatgtgggcgt
cgtggtcgcgtgaaggagccattgggcacacatggggcaatgaaatgcatattcaatgga
gtggtgcagcaacatgacgttgtgtgcatgaacttatacaagcgtgcttatcccaaatgg
cccgagcgtatgtacccgcagcttctgtga
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