KEGG   Brassica napus (rape): 106451892
Entry
106451892         CDS       T04128                                 
Name
(RefSeq) PH-interacting protein-like isoform X1
  KO
K11797  PH-interacting protein
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106451892
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106451892
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Bromodomain NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Auxin_resp Beta-prop_HPS5 VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F WD_LRWD1 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 106451892
NCBI-ProteinID: XP_013749367
LinkDB
Position
C4:62711845..62720582
AA seq 1558 aa
MDWIHKSSTPCLDTSSSVPANVPPLQRQDRLACHSSPADVDMDLREVYFLILHFLSNGPC
DRTFGHLRDEILEKGLLPRRYHSWWSRSGTCTARADVDDDDGISLPLSYDNLVERYPHIE
KDHLVKLLKQLILNPPFPSHLRVEGNTLNAADVPTLLGSGSFSLVDHKITESQKASHVAS
YLRWPHMHADQVRGLSLREIGGGFRKHHRAPSIISACHAIAKPSTMVQKMQNIKKLRGHR
NAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASA
SNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQ
WLPRIYVPNPLDAGTGKSNFPSSNAASTSNASKSHQILCCAYNANGTIFVTGSSDSNARV
WSASKSNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPRSSTTETLREDSYPKFKNSW
FCHDNIVTCSRDGSAIIWTPRSRKFHGKSGRWTKGYHLKVPPPPLPPQPPRGGPRQRLLP
TPRGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIA
MSAGYDGKTIIWDIWEGIPIKVYDIGRFKLVDGKFSQDGTSIVLSDEVGQIYFLNTGQGE
SQKAAKYDQFFLGDYRPLIRDTNGHVLDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMF
QQRRLGALGVEWRPSSIKFSVGPDFSLGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHE
VLSDDNDSEYNAEVSSDGAKASPCSNSSNELECSSEDSDVENIYENSYNRKRRRQHPRAD
VATSSGRRDKRILDEVDSSEFGKKRIKNRRIGVKASKRRYSDVKESRPQRAAAQNARSLL
SKISGSSSDEADDSSSSDSDRSASPLQQLEKPSQKLESLSNDKQKKRLIVKISVKKPTES
VESKRGVMSQADLEHVSSKSLEDNHKVIGIYSREAGSSSVDAKGASWCQDMPHSMSTPQR
EKANNHLIKSSDQDQNMCKWREEIPLCESTKLTESENIVEAQTSNGDDDDLSIVEPFSVQ
RRHCDVDTSTEAEEIIPKKVRRLRLKLRHPSSPLKIEPDEVADDFGDGGEGLASIAPSSM
NPVMDSEPVRDNVRNSPAHNAEFGEATADVIRRKRSMRLKATSSHSSARNSVLRLRSGSA
SIDKVKKQEIPSTSVYDGASLEEWPSTSRSRSASTSKQSLNTGIRLNNVSRKVSWLMLSE
HEESCRYIPQLGDEVVYFKQGHKEFLESRELNDSDRSRYLPRNLGAVEFCKVEKLNYDTY
PGSGESCCKMTLRVLDSSSSHASRKEFQLTLPDLINFPDFIVEKTRYDAAMKTNWEVGDE
CRVWWRNESSEGGAWWDGRIESSQVKSPNFPDSPWERYKVVYETGDTNLHSPWEFDNPQF
PWENSTMDEEPREKLLSLFAGLVKSISKHQDSYGIQKLNEAAQKMDFCNRFPVPLYPELI
HQRVENRYYRSMGSFKHDVDAMLSNAESYFGTNSHMRSKIKRLRDKITKTLRKVSHSC
NT seq 4677 nt   +upstreamnt  +downstreamnt
atggattggattcacaaatcatctactccttgtttggacacttccagttctgttccagca
aatgttcctcctcttcagcgacaggatagacttgcttgccattcttcgccagccgatgta
gatatggaccttagggaagtctatttccttatactgcattttctttccaacggcccctgc
gatcgaacctttgggcatctgagagatgaaattttggaaaaggggcttttgccacgtaga
tatcactcctggtggtcaagaagtggcacttgcactgcccgtgctgacgttgatgatgat
gatggcatctcgctccctttgagttatgataacttagtagagaggtatccccatattgaa
aaggatcacttggtgaagcttctcaaacaactcattttaaacccaccttttccttcacac
ctgagagttgaaggaaatactctcaatgctgctgatgttcctacgctattgggatctggc
tccttttcacttgtcgatcataaaattacagagtctcaaaaagctagccatgttgcatca
tacttacgttggccgcatatgcacgccgatcaagtgcgtggcctaagtcttagagaaatt
ggaggaggtttcagaaaacaccaccgtgctccgtccattatttcagcatgtcatgcaatt
gcaaaaccatcaacaatggttcagaagatgcaaaatataaagaagctcagaggacatcgt
aatgctgtttactgcgctatatttgatcgttctggaagatatgttatcactggttccgat
gaccggcttgtcaaaatttggtcaatggaaactgcgctttgcttggctagctgccgcggc
cacgaaggtgacattacagacttggccgttagttcaaacaatgctttggttgcatcagcg
tcaaacgattttgtgattcgagtttggaggttgcctgatggaatgccaatttctgtattg
cggggacatactggagctgttactgcgattgcattcagtcccagacaggcgtcggtttac
caacttttatcgtcatcagatgatggaacctgtcggatctgggatgctaggtactctcag
tggcttcctcgaatctatgttccaaatccgttggatgctggcactggaaaaagcaatttt
ccatcttctaacgcggcatctacaagcaatgcatcaaagagtcatcaaatactatgttgt
gcgtacaatgcgaatggaaccattttcgtcacgggtagctctgacagcaatgcgagggtt
tggagtgcctcaaaatctaacttggatgatgctgaacagccgactcatgagctggatgtt
ctacgtggccatgagaatgatgtcaactatgtgcagtttagtggctgtgctgtggctcca
agatcttctacaactgagactctgagggaagatagttacccaaagtttaagaattcctgg
ttttgtcatgacaacatagtaacctgctctcgtgatggtagtgcaattatatggacacca
agatcacgtaaattccatgggaaatctggacgctggacgaaaggatatcatttgaaggtt
ccacctcctccacttcctccacaacctcctcgaggagggccacgccagaggcttcttcca
acaccacggggtgtcaatatgattatatggagcctggataatcgtttcgtacttgccgct
atcatggattgcaggatttgtgtttggaatgctgctgatggtagcttagtgcattgttta
acaggtcacagtgaatcgtcctatgtcttggatgtccaccctttcaatccacggattgct
atgagcgccggctatgatgggaaaacaatcatctgggatatatgggagggtataccaatc
aaagtatacgatatcgggcgatttaagttggttgatggaaagttttcacaagatgggaca
tctattgtgctttctgatgaagttggccagatatattttctaaacacgggacaaggagag
tctcaaaaagctgctaaatacgaccagttcttccttggtgattaccgtcctcttattcga
gataccaatggacatgttcttgatcaggagactcagcttcttccccatcggaggaacctt
caagatcttctttgtgattcaagtatgattccgtatccagaacctgaccagacaatgttt
cagcaacgcagactgggtgcattaggagtcgaatggcgtccttcctcgattaagttttct
gttggccctgattttagtctaggtcaagactatattatgcctcctttggcagatctggat
agattgatcgagccactgcctgagtttatagatgctatgtactgggaaccagaacatgaa
gttctgagtgatgacaatgattcggagtacaatgctgaagtttcctctgatggagctaag
gcaagcccatgttccaactcttcaaatgagcttgagtgcagttccgaggacagtgacgtt
gaaaatatttacgaaaatagttataatcggaaaagacgaagacaacatcctagagctgat
gtggctacttcatctggaaggcgtgataagaggattttggatgaggttgatagctccgaa
tttggaaaaaagagaatcaaaaaccgaagaattggcgtgaaggcttcaaaaagaagatat
tctgatgtcaaggaatcacgaccgcaaagagcagccgcgcaaaatgctcggtccttgctt
tcaaagatttctggaagctcttcggatgaagctgatgattcatccagtagtgactctgat
agaagcgcatcacctttgcaacagttggagaagccatctcagaagctggaatctctttca
aatgacaaacaaaagaaaagattgattgtaaagatctcggttaagaagccaacagagtct
gtggaaagcaagagaggtgtaatgagtcaagctgatttggagcatgtttcttcgaaatct
ttggaggataatcacaaagtaattggtatatactctagagaagctgggtcaagttctgta
gatgcaaaaggtgcgtcatggtgtcaggatatgccccattctatgagtacgccacagaga
gaaaaggccaataatcatttgattaaatcttcagatcaggaccagaatatgtgcaagtgg
agggaagagattcctctttgtgaatccaccaaattaaccgagtctgagaacattgtagaa
gctcaaacatctaatggggatgatgatgatttgtcaattgttgaaccattctctgttcag
cgaagacattgtgatgtagatacttccacggaagccgaggagattattccaaagaaagtt
cgacgactgagattaaagcttcggcaccccagcagtcctctaaaaatagagcctgatgag
gtagcagatgattttggagatggtggagaaggtcttgcatccatagctccctcttccatg
aatcctgttatggattctgaacctgtgagagataatgttagaaactctcctgctcacaac
gctgagtttggagaagctacagccgatgtgatacgtaggaagagatctatgagactgaag
gccacttcaagtcactctagtgcaagaaacagtgtattacgtttgaggtcaggctctgca
tcaatagataaagtaaagaaacaagaaattccttccacaagcgtgtatgatggtgcctca
cttgaagaatggccttctacttcaaggtcccggtctgcaagtaccagcaaacaaagtctt
aatactgggataaggttgaataatgtgtcaaggaaagtctcatggttgatgttgtcagaa
cacgaggaaagctgccgctatataccccagctaggggatgaagttgtttacttcaagcag
ggacataaagagttccttgaaagtagagaattaaatgacagcgaccgatcaaggtacctt
ccacgaaacctaggagcggtagagttttgtaaagtcgagaaactcaactacgatacatat
cctggttctggcgagagctgctgcaaaatgactctcagggttctggattcttcttcatcg
catgcctctcggaaagagttccaactaacactgcctgacctcattaattttccggatttt
attgtggagaagactcgatacgatgctgcaatgaaaacaaactgggaagtcggggatgaa
tgccgtgtgtggtggagaaacgagtccagtgaaggcggtgcttggtgggatggaaggatc
gagtcttcacaggttaagtcccctaacttcccagacagtccatgggagagatacaaagtt
gtctatgaaactggggacacgaatctccacagcccctgggagtttgacaatccccagttt
ccttgggaaaactctaccatggacgaagagccaagagagaaactactttctttatttgct
ggactagtgaagtcaatcagcaagcatcaggatagttatggaatccaaaagctaaacgaa
gctgctcaaaagatggatttctgcaataggttcccagttcctttatacccagagctgatt
caccagagagtagagaatcggtactacagaagtatggggtcgtttaagcacgacgtggat
gcaatgctgtcaaacgctgaatcttattttggtacaaactcacatatgcgttctaagata
aagcggctccgagataaaatcacaaaaacgttgagaaaggtttcacatagttgttga

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