Brassica napus (rape): 106451964
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Entry
106451964 CDS
T04128
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
bna04382
Cornified envelope formation
Module
bna_M00094
Ceramide biosynthesis
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106451964
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106451964
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106451964
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106451964
Amino acid related enzymes [BR:
bna01007
]
Aminotransferase (transaminase)
Class II
106451964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
106451964
NCBI-ProteinID:
XP_013749417
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All DBs
Position
A3:complement(31392198..31394974)
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AA seq
480 aa
AA seq
DB search
MDTNLVEMFRAGLNWVTMALDAPSARVVLFGVRIQWHIFVEVLLGFVIVILLSQKSYKPP
KRPLTEQEIDELCDEWVPEPLIPPITEDMMHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHQKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLSTPDTILYSYGLS
TMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMDSLRSTLEKIMTKNK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYKFRVILDESNSFGVLGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPELLVKMKHNIALLWKGLKDIKGMSLASDPESPIVFLKLEKSSGSTKEDLLLLE
KMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatctggtggagatgttcagggcaggtttgaattgggtgacaatggctctg
gatgctccttcagctagagttgtcttgttcggtgtccgaatccaatggcacatctttgtt
gaagttttgttgggttttgtaattgttatcctcctctctcaaaagagttacaaacctccc
aagagaccgttaactgagcaggaaatagatgagctgtgtgatgaatgggttcctgagcct
cttataccaccaattactgaagacatgatgcatgaaccaccagttcttgaaagtgctgct
ggaccgcatacgacggttaatggaaaagacgtggtgaattttgcgtctgctaattatctt
ggactcattggacaccagaagttgctggaatcatgcacttctgcgttggagaaatatggc
gttggttcttgtggtcctcgtggattctatggtactattgatgttcatcttgattgtgaa
accagaatatcaaagtttttgagtactcctgatacaatcctttattcatatgggctttcc
acgatgttcagcaccattccttgtttctgtaaaaaaggcgatatcattgttgccgacgag
ggtgttcactgggggatacaaaatggacttcagctttcaagaagcacaatcgtgtacttc
aagcacaatgacatggactctctccgtagcaccctcgagaagatcatgacaaagaacaag
cgctctaagaacttgaggcgttacattgtagctgaagctgtatatcagaactctggtcaa
atcgcacctctcgatgagatagtgaaactgaaagagaagtataaatttcgtgttatattg
gacgaaagcaactctttcggcgtgcttggccgttccgggagaggtcttgcagagcatcac
ggtgtccctattgagaagatagatgttgtgactgctgcaatgggccacgcactagccaca
gaaggtgggttctgcactgggaatgcccgcatcatcgattaccagagacttagcagttca
ggatacgtgttctctgcttctttgccaccataccttgcgagcgctgctatcacagccatc
gatgtcattgatcagaaccctgagttgttagttaagatgaagcataacattgctctgttg
tggaaaggattgaaggatatcaaggggatgtcgctagcaagcgaccctgagtcacctatt
gtcttcttaaagctagagaaatcgagtggttcgactaaagaggacttgcttctactcgag
aaaatggctgatcgtgcgctgaaggaagactcgttgttggttgtgagctctaagaagtcg
tttcttgataagtgccggttgcctgtgggtatcaaactcttggtctcagcgggacattca
gagtctgatcttgttaaagtatctgagtctctgaagagactcgcttcagagcttctactc
taa
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