Brassica napus (rape): 106452088
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Entry
106452088 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X2
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106452088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106452088
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106452088
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
HECT type E3
106452088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
106452088
NCBI-ProteinID:
XP_013749563
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All DBs
Position
A5:complement(22656152..22663242)
Genome browser
AA seq
1032 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKERDAPKLLEQTRMERNRRLLQKQQNAAALKIQKFFRGRR
SVAIERSKVRREFCETYGNNCQNVDRNCFEPGSSFLRQLLFFFKAQNSGDFVILVETCRL
LKIFTHSNGDILSLFSGLDYSAEHNLVDFRVKKLAFTCIDAIHHNRDRLRDQLLVTTEEA
STSTAILMEAMSLVLDPKLPWVCKTVSYLQKRHIFQLVRDIVITAKESPRGQTMIGSILS
LERVLILVVTHVGREPCCCPVVDPRWSFSSMILTIPLIWQLFPNLKVVFANPNLSQHYIH
QMAFCIQKDTHVLPTDTSAEFPGYACLLGNTLETANVVLSQPDCSLDMAVDIASVATFLL
ERLPPVKSSERESKQSSSEEDDMLIDDIPEFVLNKTLEQQITTNAIDSRFLLQLTNVLFH
QVSLGTQPYDEEKEARAIGTASSFLYAAFNTLPLERIMTVLAYRTELVVVLWNYMKRCHE
NQKWSSMPNLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLI
IILKQALWQLLWVNPLTQPSTGKSVSNNLSKKNPVGLIQNRAGVVVAELLSQLQDWNNRQ
QFTSSSDFQADTVNEYFISQAIAEGTRANYILMHAPFLIPFTSRVKIFTTQLATARESHD
HGSQAIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIF
KDFMEKITRAAFDVQYGLFKETVDHMLYPNPGSGMVHDQHLQFFHFLGTLLAKAMFEGIL
VDIPFATFFLSKLKHKYNYLNDLPSLDPELYKHLIFLKRYKGNIAELELYFVILNNEYGE
RTEEELLPGGKDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKECIDMFN
EHELQVLISGSADSLDIDDLRQNTNYTGGYNAGHYVIDMFWEVLKSFSTENQKKFLKFVT
GCSRGPLLGFKYLEPAFCIQRAAGSASNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLM
YAISAEAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccgtcgactcggaagcgagttgatttaggtggccggagcact
aaggagagagatgctcccaagcttctggagcagacgaggatggagcggaatcgccgtctg
cttcagaagcagcagaatgccgctgccctcaaaattcagaaattctttagaggtagaaga
tcagtggccattgagcgctccaaggtgaggcgtgagttctgtgaaacctatgggaataat
tgccagaatgttgacaggaattgctttgagccaggttcaagtttcctccgtcagttactg
tttttcttcaaggcacaaaactcgggagattttgtgatacttgtggagacgtgtcgccta
ctgaaaatttttactcacagcaatggtgacattctcagccttttctctggcttggactat
tccgctgagcataacttggtggattttagagtaaagaaacttgcttttacctgcatcgat
gctatacatcataatagggaccgtttaagggatcagctgttagttactactgaagaagct
agcacctcaacagctatcttgatggaggcgatgtcattggtgctagatcctaagctgcct
tgggtttgcaaaactgtgagttatctacagaaaagacacatattccaactagtcagagat
atcgtcattacagctaaggaaagccctagaggccagactatgatcggtagcattctttca
ctagaaagagtattaatcctggtagtaactcatgttggccgtgagccatgttgctgccct
gttgttgatccacgttggagtttctcatctatgatccttacaatacccttgatatggcag
ctcttcccaaacctgaaagtggtctttgccaacccgaatctaagtcaacactacattcac
cagatggctttctgtattcaaaaagatacccatgtcctcccaacagatacaagcgcagag
tttccaggttatgcttgtcttcttggtaatacgttggaaactgcaaatgtggtgttgtca
cagcctgactgttcattggatatggcagttgacattgcatcagttgcaactttcttgtta
gagagacttcctcctgtgaagtcatcagaaagagaaagcaaacagagctcttctgaggag
gatgatatgttgattgacgatataccagaattcgtcttgaataagactctggagcagcag
ataaccaccaatgctatagactcacgttttcttctgcagttaacaaatgttttgttccat
caagtttcgcttggtacgcagccatatgatgaagaaaaagaagcacgagctattggcaca
gccagttcttttctgtatgcagcattcaacaccctccctcttgagagaatcatgacagtt
ttagcttatagaaccgagcttgtagttgtgttgtggaattatatgaaacgatgccatgag
aaccagaagtggtcatccatgcctaatctcctagcttaccttccaggagatgctccgggt
tggctattacctctggttgttttttgtcctgtttataagcatatgcttatgatagtcgac
aatgaggagttttacgagcgagagaagccactgtcgctacaagatatcagattgcttatc
atcattctcaagcaagctttatggcagttactatgggtgaatccacttacgcagcctagc
acggggaaatctgtctccaacaacctctcaaagaagaaccctgttggcttgattcagaac
agggctggggttgtagttgctgaattactttcacagttacaagattggaacaaccggcaa
caattcacttcctcgagcgatttccaagctgatacagtcaatgaatattttatctctcag
gcaatagcggaaggtacaagagccaactacatactgatgcacgctcctttcctgattccg
tttacaagcagagtcaagattttcacaacacaattagcaacggccagggagagtcatgat
catggatctcaagccatttttgctcgaaatcggttcagaatacgaagagatcacatcttg
gaagatgcttacaatcaaatgagtgcattgtcagaagatgatctccggggatcgatccgc
gtgacatttgtcaatgaacttggagttgaggaagctggtattgatggtggtggcattttt
aaagacttcatggagaaaattacccgagcagcctttgatgtgcaatatgggttgtttaag
gagaccgttgatcacatgctttatcctaatcctggatcaggaatggtacatgaccagcat
ctccagttctttcattttctcggcactcttctcgcaaaagctatgtttgaagggattcta
gttgatataccatttgcaacttttttcctcagcaaattaaaacacaagtacaactatttg
aacgatttgccttctctggatcctgagttgtataagcatcttatatttctgaagcgttat
aagggtaatatcgcagagttggagctttactttgttattctcaacaacgaatatggagag
aggacagaggaagagttacttccagggggtaaagacatgcgggttacaaatgagaatgtt
ataactttcattcatctggtttcaaatcatcggttgaattttcagatacgccaacagagt
tctcatttcttgagagggtttcagcaactcattccaaaagaatgtatcgacatgttcaat
gaacatgagcttcaggttcttatatctggttcagctgatagtttggatattgacgacttg
cgtcagaacactaactatacaggaggctacaacgctggacattatgtgattgatatgttc
tgggaagttctgaaaagcttctcaaccgaaaaccagaagaagttcttaaaatttgtgaca
ggctgttcgagaggaccactgcttggtttcaaatacttggaacctgcattctgtatacag
agggctgcgggtagcgcgagtaatgaagcagttgatagactacctacatcagccacttgt
atgaaccttctcaagcttcctccctatcaaagcaaagagcaacttgagaccaaattgatg
tacgccataagcgcagaagcaggttttgacctgagctga
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integrated database retrieval system
