Brassica napus (rape): 106452193
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Entry
106452193 CDS
T04128
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106452193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106452193
03036 Chromosome and associated proteins [BR:
bna03036
]
106452193
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106452193
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106452193
Chromatin remodeling factors
BAF complex
106452193
PBAF complex
106452193
GBAF(ncBAF) complex
106452193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Viral_Hsp90
HDA2-3
AAA_14
Bromodomain
Motif
Other DBs
NCBI-GeneID:
106452193
NCBI-ProteinID:
XP_013749689
UniProt:
A0A817ASY2
LinkDB
All DBs
Position
A4:21550486..21559346
Genome browser
AA seq
2164 aa
AA seq
DB search
MQSGGSGGGPARNPGMGPAGRTNSTSSAASPTSSSSSVQQQQQQQQLASRQQQQQGRNSE
ANDGMFAYHPGGVQGMMGGGNFGSSSGSMQQPQQPRRLFDSPQQQQGSSQEGQQSFNPMQ
QAYLQFALQAQQQKAQQQARMGMMGSSKDQDARMGMLNMQGAMPMQASNQAQGSSSNPSA
EQFARGERQMESGHETKPHPQQVGTGQLMPGNITRPMQAPQGPQGVNNMGTNQLAFSQQW
QAMQAWARERNIDLSHPANASQMSHILQGRMVAQQKANEGNVASQSPSIPVSSQPSSSSG
VPGENSPRPNSAGDISGQSGSGKARHAIPTSSFASTSSPRMMNPAANPFSAQGRDNPPYP
RHLVQPTNGMPSGNSMQTSANETHVLDHNASTNKGLGSAEHLQMQQPRQMNAPSPKAVIS
DAGLLSKSSLQSGQGIKQEQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPQELFKSIAP
PPLEVQTPLQIFPVRVHGQDRSSDKTVENQARSLESGKESQTAASSNGQIFAKEEDNVGG
TEVPLAMGHSQLFQNLGKEAASTAAATKEEQQADVFPVKSDQGADASTQQTPRSDSNADK
GKAVASDGGQSNVPPQANSPQQPKDTAPARKYHGPLFDFPFFTRKHDTYGSATANANNNL
TLAYDIKDLVCEEGAEFFNKKRTDSLNKINGLLATNLERKRIRPDLVLRLQIEEKKLRLS
ALQSRVRDEVDRQQQDIMSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQ
WRKKLLEAHWSIRDARTARNRGVAKYHEKMLREFSKRPDDGRNKRMEALKNNDVERYREM
LLEQQTNIPGDAAERYNVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAIAARLQ
GLSEEEVRAAAACAREEVLIRNRFVEMNAPKDNSSVNKYYTLAHAVNEVVVRQPSMLQAG
TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN
AVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLS
KVDWKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDV
FDNRKAFHDWFAQPFQREGPSHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGS
LPPKVSVVLRCRMSSIQSAVYDWIKATGTLRVDPDDEKLKAQKNPIYQAKIYKTLNNRCM
ELRKTCNHPLLNYPYFNDLSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDI
LEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTV
VIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKISSHQKEDELRSGGSMDLEDD
LAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDDERYQ
ETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTCHEQVPKWLRASTREVNTTV
ADLSKKPSKNMLSSSNLIVQTGGPGGERKRGRPKSKKINYKEIEDDIGLFSEESSEEVNV
DSGNEEEGDIGQSDDDELTGALGDQQTNNGESDGENPVAGYDYPPRSGSYKKVPPQDDAG
SSESSPESHRSKEMASPVSSKKFGSLSALDTRPGSVSKRLVDDLEDGEIGASGDSHIDLQ
RSYDRDEGGGEQVLQPTIKRKRSIRLRPRQTAEGTDVSDVPAAQPLQVDRSYRSKLRTVA
DSHGSRQDQSDSSSRLRSLPAKKVANTSKLHVSSPKSGRLNATQLPVEDNDEAARETWDG
TSPIGSSNAGARMSHTIQKRCKTVISKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVN
NLLELREIDQRVERLEYVGVMELASDVQYMLRGAMQFYGFSHEVRSEARKVHNLFFDLLK
MSFPDIDFREARNALSFSGPSPTLVSTSSPRGAGGISQGKRPKPVDEEEPEEPSSPQRRQ
QRENSRIRVQIPQKDPKLGGTSSHTDESPILAHPGELVICKKKRKDREKSAPRTRTAGSS
SPVSPQAMIGRGLRSPVSGSVTRETRLAQATHPNNSGAAGDSVGWANPVKRLRTDSGKRR
PSHL
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggaggcagtggcggaggccccgcccggaatccgggcatgggtccggcgggt
cggaccaactccacatcatccgctgcgtctccgacttcttcatcttcatccgtgcaacag
caacagcagcagcagcagctggcgtctaggcagcagcagcagcaggggagaaactcagag
gcaaatgatggcatgtttgcgtatcatcctgggggagttcaggggatgatggggggtggt
aactttggttcttcgtctggctctatgcagcagcctcagcagcctaggagattgtttgac
tctcctcaacaacaacagggctcttcccaagagggccagcaaagttttaatccaatgcaa
caagcgtatcttcagtttgctttacaggcacagcaacaaaaggcacagcagcaagctaga
atgggaatgatgggttcatctaaggatcaagacgcacggatgggtatgttgaatatgcaa
ggcgcgatgccgatgcaggcatctaatcaggctcagggctcttcgtctaatccatctgct
gaacagtttgctcgcggtgaaaggcagatggaatcaggtcacgaaacaaaaccccatccc
cagcaagttgggactggacaactaatgcctggaaatattacaaggccaatgcaggcacca
cagggtccgcagggtgtcaataatatggggaccaaccaactcgcgttttcgcagcagtgg
caggccatgcaggcatgggcgcgcgagcgtaatattgatctctcgcatcctgccaacgca
agccaaatgtcgcacatactccagggaagaatggttgcccaacagaaagctaatgaaggc
aatgtggcttcacagtcaccatctattccagtgtctagccagccatcttcatcttcaggt
gttccaggtgagaactcgcctcgtcccaactctgctggtgatatctctgggcagtctgga
tcaggaaaggccagacatgcaatacctaccagctcatttgcctcgacttccagtcccaga
atgatgaaccctgctgcgaatcccttctccgcccaagggagagataatccaccgtatcct
cgacatttagttcagcctacaaatgggatgccatcaggaaattccatgcagacgtctgca
aatgagacgcatgttttggatcacaatgcgtctacaaataaaggtttaggttctgctgaa
catttgcagatgcagcagcctaggcagatgaatgcacccagtccaaaagctgttatatct
gacgctggtttactcagtaaatcttcccttcaaagtggacaggggatcaaacaagaacaa
cagcgatcaggatttaccaaacaacaactccatgttctcaaagcccagatactggcattt
cgtcgtttgaagaaaggagaaggttctttgcctcaggagctttttaaatctattgctcca
ccaccgcttgaagtgcagacgccgttgcagatttttcctgtgagggtacatggtcaggat
aggtcttcagacaaaactgtagaaaaccaagcaaggtcactggagtctggcaaagagtct
cagactgctgcttcttcaaatggacagatttttgctaaagaggaagataatgttggaggt
acagaagtacctttggcgatgggccacagccaattatttcaaaatctgggaaaagaagct
gcttctactgctgcggctacgaaagaggagcaacaagctgatgtattccctgttaagtca
gatcaaggagcagatgctagtactcaacagactcctagaagtgattctaatgctgataag
ggaaaagctgttgcatctgatggaggccaatctaatgttccgccacaagcaaactctccc
cagcagcctaaggatacagcccctgccaggaaatatcatggaccattgtttgattttccc
tttttcactcgaaaacatgacacttatggatctgcaacagccaatgccaacaacaacctc
acattagcttatgatatcaaagacctggtctgtgaagaaggtgcagaattcttcaacaag
aaaaggacagacagtttgaacaagataaatggtctcctagcaacaaacttggaaaggaaa
aggattaggcctgatcttgttttacggcttcagattgaagagaaaaagctcaggctatcg
gctcttcagtctcgtgttagagatgaagtggatcgacagcagcaggatataatgtccatg
cctgataggccataccgtaaatttgtgaggttgtgcgaacgacaacgccttgaaatgaat
agacaagtactggccaaccagaaagctgttagagagaagcagctgaaaaccatttttcag
tggcgtaagaaactccttgaggcacactggtctatacgtgatgcacgcactgctcgtaac
aggggagttgccaaataccatgaaaagatgttgagagagttctcgaaaagaccagatgat
ggccggaacaaaaggatggaggcattgaaaaataatgacgtagaaaggtacagggagatg
ttgctggaacagcaaacaaatatacccggtgatgctgctgaaagatataatgttctctct
tcatttttgacccaaacggaagattatctccataaacttggaggtaagattactgcgaca
aagaatcaacaggaagtggaggaagcagcgaatgctgcagcaattgcagcgagattgcag
ggcctttcagaagaagaggtcagggcggcagctgcttgtgctcgggaagaagttctgatc
agaaatagatttgtggaaatgaatgcgccaaaagataattcatctgttaacaagtattat
actctggctcatgctgtaaatgaagtcgttgtgagacaaccatcgatgctccaagctgga
actttgcgtgattaccagctggttggattgcaatggatgctctccttgtataataacaaa
ttaaatgggatcttggctgatgagatgggtcttggaaaaactgtgcaggtaatggcactg
attgcttaccttatggagttcaaggggaattatggaccacatctcatcatcgttcccaat
gctgttctggtgaactggaagagtgaactccatacttggctgccatctgtttcatgcata
tattatgttggtacaaaggatcaacgttcaaaattgttctctcaggaggtttgcgccatg
aagttcaatgtcctcgttacgacttatgagttcattatgtatgatcgatcaaaactctca
aaagttgactggaaatatattgttattgatgaagcacaacggatgaaggacagagaatct
gttttggcccgagatcttgatcggtatcgctgccagaggagattacttctcactgggaca
cctctacagaacgatctgaaagagctttggtcactattgaatctcctccttcctgatgtc
tttgacaatcgaaaagcatttcatgattggttcgctcaaccctttcaaagagaaggtcct
tcgcataatatagaggatgactggctggagactgagaaaaaggtcatagtcattcacagg
cttcatcaaattttagagccgttcatgctcaggcgtcgtgttgaggatgtcgaaggttca
cttcctcctaaggtttccgtagttttaagatgtaggatgtcttctattcagagtgccgtt
tatgattggatcaaagctactggaactctaagagttgatccagacgatgaaaaacttaag
gctcagaagaatccaatctaccaagccaagatatataagactttaaataataggtgcatg
gagttgaggaaaacatgcaatcatccgttgctcaattatccatatttcaatgatctttcc
aaggattttctcgtaaggtcgtgtggaaaattgtggattctggatagaattcttataaag
ctgcagaggacaggccatcgtgtattactcttcagtacaatgactaaactccttgatatc
ttggaagagtatctgcaatggaggaggcttgtataccgaagaatagatgggactaccagt
ctagaagatcgggaatcagctattgtggatttcaatgatccggatactgattgctttatt
ttcctgcttagtatacgtgcagctggaaggggtctcaaccttcagactgctgacacagtt
gtgatatatgatccggatccaaaccccaagaatgaggaacaagcagttgccagagcccat
cgtattgggcagacgagggaagtaaaagtgatttatatggaggcagttgttgaaaaaatt
tccagccatcaaaaggaggacgagcttagaagtggtggatcaatggacctagaggatgac
ttggctggaaaggaccgttatataggatctattgagggtctcataaggaacaatattcag
cagtacaagatcgacatggctgatgaagtcattaatgctgggcggtttgaccaaagaacg
actcatgaagagcggcgaatgacattggagactttattgcatgatgacgagagatatcaa
gaaaccgtccatgatgtaccttctctccatgaggtgaacaggatgattgccagaagcgag
gaagaagttgagttattcgatcagatggatgaagaatttgactggaccgaagagatgact
tgtcatgagcaggtgcctaagtggcttcgagctagtaccagagaggtgaatactactgtt
gctgatttgtctaagaaaccgtcaaagaacatgttgtcaagcagtaatctaattgtgcaa
actggcgggcctggaggtgagagaaaaagagggcgtcccaagagcaaaaagattaactac
aaggaaattgaagatgacattggattattttctgaggaaagctctgaggaagtgaacgtt
gattctgggaacgaagaagagggagacattggacaatctgatgatgatgagctaactggt
gctcttggtgatcaacaaaccaacaatggcgaatctgatggagagaaccccgtcgctggt
tatgattatcctccgcggtctggtagttataaaaaagtccctccacaggatgatgccggt
tcttcagaatcttcgccagaaagtcatagatcgaaagagatggcttctcctgtttcttca
aaaaaatttggctctttgtctgcattggacactaggccaggttctgtctcgaaaagactg
gtagatgacctagaagatggggaaataggagcctctggggattctcacatagatctccaa
cgatcctatgaccgtgatgaagggggaggagaacaggttttgcaacctacaataaaacgg
aaacggagtattcgtctaagaccccgtcaaacagcagaaggaacagacgttagtgatgtg
cctgcagctcagccattgcaagtcgatcgtagctatcgatcaaaattgaggacagttgct
gactcgcatggttcaagacaagatcagagtgattcatcctcgagactcaggagtttacct
gcaaagaaggtagcgaatacttccaagctgcatgtatcatcaccaaagtctggtagattg
aatgccacacagcttcccgtggaggacaacgatgaagctgctagagaaacatgggatgga
actagtcctattggctcgtcaaatgcaggtgcaagaatgtcccacaccatacagaaacgg
tgcaaaaccgtcattagcaaactccaaagaagaatcgacaaggaaggtcagcagattgtg
ccaatgctgacgaatttgtggaagagaattcagaatggttatgcagctggaggtgtgaat
aatcttttggagctacgagagatagatcagcgggtggaaaggctagagtacgtaggagtt
atggaactcgcatctgacgtgcagtatatgctaaggggagcaatgcaattctatggattc
tcacacgaggtgagatctgaagcaaggaaggttcacaacctcttcttcgatctactgaaa
atgtcttttccagacatagacttccgggaagcaagaaacgctctttccttctctggccca
agcccaactttggtatctacatcgtcaccaagaggagcaggtggtattagtcagggtaag
aggccaaagccggtagatgaggaggaaccggaggagccaagctctcctcagagacgtcaa
caacgcgagaactcaaggatcagagtacagatacctcagaaagatccaaagcttggcggg
acatcaagccacaccgatgagtctccaattctagctcatccaggggaactagtaatctgc
aagaagaagaggaaagacagagagaagtctgctccgagaacccgaaccgctggctccagc
agcccggtttcgcctcaggctatgataggtcgtggtcttagaagtccagtgtctggttca
gttacaagggaaacaaggctagctcaagctactcatccgaacaacagcggcgcggctggt
gattcagttggatgggctaatccggtgaagaggctacgaacagattctggtaaaagaagg
ccaagtcatttgtag
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integrated database retrieval system
