Brassica napus (rape): 106452445
Help
Entry
106452445 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106452445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106452445
03009 Ribosome biogenesis [BR:
bna03009
]
106452445
04131 Membrane trafficking [BR:
bna04131
]
106452445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106452445
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106452445
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106452445
Membrane trafficking [BR:
bna04131
]
SNARE
SNARE associated proteins
Others
106452445
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106452445
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106452445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_18
ATPase_2
AAA_17
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
Vps4_C
NACHT
NB-ARC
Viral_helicase1
AAA_lid_PRS2_C
DUF815
TsaE
AAA_24
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
106452445
NCBI-ProteinID:
XP_013750012
UniProt:
A0A078FLX9
LinkDB
All DBs
Position
C6:24049561..24053803
Genome browser
AA seq
810 aa
AA seq
DB search
MANQPESSDPKGAKRDFSTAILEKKKAVNRLVVDEAINDDNSVVSLHPETMEKLQLFRGD
TILLKGKKRKDTVCIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSIHQCPDVKYGKRVH
ILPLDDTIEGITGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPDEYCV
VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFQTALGNSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKKAET
PEAMEEDEEEIAEIKASHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFPDA
TGTGGAAAMAGGGDPFATAGGAAEDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaacctgaatcatctgatccgaagggagcgaagagggactttagcaccgcg
attttggagaagaagaaggcggtgaatcgtttggttgtggatgaggccatcaacgatgac
aactccgtcgtgtctctacaccctgaaaccatggagaagctacagctctttcgtggagat
accatcttactcaaggggaagaagaggaaggatactgtgtgtattgctttagctgatgac
acatgtgatgaaccaaagattaggatgaacaaagttgtcaggtcgaacctgagagttagg
ctcggagatgtagtctctatccatcagtgccctgatgtcaagtatgggaagcgtgttcac
atcttacccttagatgataccattgaagggattactggaaatatatttgatgcctacctt
aaaccttatttcttggaggcataccgcccagtgaggaagggtgatcttttcctagttaga
ggagggatgagaagtgttgagtttaaggttattgagaccgatcctgatgagtactgtgtg
gtggctccagacacagagatattctgtgagggtgaacctataaagagagaggatgaggag
aggttggatgaagttggttacgatgatgtcggtggtgttaggaaacaaatggctcagatt
agggaacttgttgagctccctttgaggcatccacagctcttcaagtccatcggtgttaag
cctcctaaaggaatcttactctatggccctcctggttcaggcaagacactgattgctcgt
gctgttgctaatgagaccggtgcgtttttcttctgtatcaatggtccggagatcatgtcc
aagctagctggtgagagtgaaagcaaccttaggaaagcgttcgaggaggctgagaagaat
gcaccttccataattttcattgatgagcttgattccattgctccaaaacgagagaagacg
catggggaggttgagagaaggattgtttcacagctcttgacgctaatggatggtcttaaa
tcaagagctcatgtgattgttatgggagctaccaaccgtcctaacagcattgacccggct
ttgagaaggtttggaagatttgacagggagattgatattggtgttcccgatgagattggt
cgtcttgaagttctcaggattcacaccaagaacatgaagctcgcagaagatgttgatttg
gaaagagtatctaaagacacacatgggtatgttggtgcggaccttgcggcattatgcact
gaagctgctctccaatgcatccgggagaagatggatgtgattgacctagaagatgaggag
atagatgctgagattctcaactctatggctgtgactaatgagcatttccagacagctctt
ggtaatagcaatccttctgctctacgtgagacggtcgttgaggtgcctaatgtttcttgg
gaagacattggtggtcttgagaatgtcaagagggaactacaagagactgttcaatatcca
gtggagcatcctgagaagtttgagaagtttggtatgtcgccatctaaaggagtcctgttc
tacggtcctcctggttgtggaaagacccttttggccaaggccatcgccaacgagtgtcaa
gccaatttcatcagtatcaaaggtcccgagctcctgacaatgtggttcggagaaagtgag
gccaatgtgagagagatattcgacaaagcacgccagtctgctccttgtgttcttttcttt
gatgagctagactccatcgccactcagagagggagcagcgttggagacgccggtggcgca
gcagacagagtattgaaccagcttcttacggagatggatggtatgtctgctaagaagact
gtctttatcatcggagcaacaaacagaccagatatcatcgaccctgcgcttcttcgtccc
ggtcgtcttgatcagctcatctacattcctcttcctgatgaggagtctcgttaccagatc
tttaagtcttgcttgaggaagtctccagtggctaaggatgttgacttaagggctcttgcc
aagtacacacaagggttcagcggtgcagacatcacagagatttgtcagcgtgcttgcaag
tacgccatcagagagaacatcgagaaggatattgagaaggagaggaagaaggcagagaca
ccagaagcaatggaagaggacgaggaggagattgcagagataaaagctagtcattttgaa
gaatcaatgaagtttgcgaggaggtctgtgagtgatgcagacatacgcaagtatcaggct
tttgctcagactctccagcagtcacgtgggattgggagtgagttcaggttccctgatgcg
acaggcactggaggtgcagccgccatggctggtggaggtgacccgtttgctactgcggga
ggagcagctgaggacgatgatctctatagttaa
DBGET
integrated database retrieval system
