Brassica napus (rape): 106452512 Help Entry 106452512         CDS       T04128                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism bna  Brassica napus (rape) Pathway bna03040   Spliceosome Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106452512  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bna03021]     106452512    03041 Spliceosome [BR:bna03041]     106452512    03036 Chromosome and associated proteins [BR:bna03036]     106452512 Transcription machinery [BR:bna03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      106452512 Spliceosome [BR:bna03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     106452512  Complex B     106452512  Complex C    U2 SnRNP specific factors     106452512 Chromosome and associated proteins [BR:bna03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      106452512     TFTC complex      106452512 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  106452512 NCBI-ProteinID:  XP_048615199 LinkDB All DBs Position C5:complement(51308744..51316575) Genome browser AA seq 1356 aa AA seqDB search MAAPEDESSAQSQSSSAAAAAPTPPPPPSSAGDHYLAKCVIRPSVVLQVAYGYFRSRSSR GIVFGKETCIELAVIGEDGVVESVCEQNVFGTIKDLAVIPQSNKPYSTSFQMGKDLLAVL SDSGKLSFLSFSNEMHRFSPIQHVQLSSPGNSRDQLGRMLTVDSSGLFLAVSAYHHRFAL FSLSTSSMADIILKRIFYPSEDGGKASSEQAVSGTIWSMCFISKSFNESMDYDPVLAIVL NRKGSLLNELVLFRWNVKEESVCLISEYVEAGALAHSIVEVPHSSGFAFLLRMGDALLMD LRDPQNPCCLVRTSLDFVPASLVEEQFLEESCRVQDGDDEGLFNVAACALLELRDYDPMF IDNESDNGKLSSKHVSSWTWEPEHNHNPRMIICLDDGEFFMFELIYEDDGVKVNVSECLY KGLPCKEILWVEGEFLATFAEMADGTVFKVGTEKLHWMSSIQNIAPILDFSVVDDQNEKR DQILACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFV EETRVLSVGLSFKDVTDSVGFQPDVCTLACGLVADGLLVQIHRDAIRLCIPTVDAHADGI PVSSPFFSPWFPENVSISLGAVGENLIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTL QYEVSCISIPQKYIGKKRHRASSLDNSCSKAAIPSGMERGYTFLIGTHKPSVEVVSFSEE DGGGVRVLASGMVSLTNTMGTVISGCIPQDVRLVLVDQVYVLSGLRNGMLLRFEWPPFSH SSGHCKEEMDSVVSDLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLS YTSISFQPSTHATPVCSPECTQGILFVAENCLHLVEMVHSKRLNAQKFHLGGTPRKVIYH SESKLLIVMRTDLYDACTSDICCVDPLSGSVLSSYKLKPGETGKSMELVRVGNEQVLVVG TSLSFGPAILPSGEAESTRGRLIILCLEHTHNSDSGSMTICSKAGSSSQRTSPFRDVVGC TTEQLSSSSLCSSPDDNSYDGIKIDESETWHLRLACATTWPGMVLAICPYLDHFFLASAG NAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYFTRIVVGGCRDGVLFYSYHEDVKKLH QIYCDPAQRLVGDCFLMDANSVAVSDRKGSIAILSCKDHSDFEYSNPESNLNLNCAYHMG EIAMAIKKGCNIYKLPADDVLRSYGLSKSIDAADDTIIAGTLLGSIFVFAPISREEYELL EAVQAKLVVHPLTAPVLGNDHKEFRGRENPSQATKILDGDMLAQFLELTNRQQESVLSTP QPSSSTLKSSSKQCSSPPLMLHQVVQLLERVHYALH NT seq 4071 nt NT seq  +upstreamnt  +downstreamnt atggctgctccggaggatgaatcttccgctcagtctcaatcttcctctgccgctgcggct gctcccactcctcctcctcctccttcctccgccggggatcattacctcgctaagtgcgtc atccgccccagcgtcgttctccaggttgcttatggttatttccgctctcgctcctcccgc ggcatagttttcggcaaggagacctgcatagagttggcggttatcggtgaagacggggtt gttgaatcggtgtgtgaacagaatgtatttggaactattaaggatttggctgttatacct cagagtaataaaccatactcaactagttttcagatgggtaaagaccttttggctgttctt tctgattctggaaagctctcatttctctcatttagcaatgaaatgcataggttctcgccg atacaacatgttcaactgtctagtccaggaaattcgagggatcaacttggaagaatgctc actgtagattctagcggactttttcttgctgtcagtgcatatcatcatcgttttgcgcta ttttccctctcaacatcgtctatggctgatattattcttaagaggatattttatccttct gaggacggagggaaggctagctctgaacaagcagtatctggtactatttggagcatgtgt ttcatttctaaaagttttaatgaatccatggattatgaccctgttcttgccatcgttttg aataggaaagggtctctcctgaatgagctagttttgtttagatggaatgtcaaagaggaa tccgtttgtctaatatcagagtatgtcgaagctggagctctagcacatagtattgtcgaa gttcctcactcctctggattcgcctttctgttaagaatgggtgatgcgctcttaatggat cttagggatcctcaaaacccttgctgtttggttaggacatccttagattttgttcccgcg tcattagttgaagagcagtttcttgaagagtcgtgtagagtacaagatggagacgatgag ggtctttttaatgttgctgcatgtgctttgttagagctcagggattatgatcccatgttc atagataatgaaagtgacaatggaaagttgagttccaagcatgtctcttcatggacttgg gagccggagcataatcataatccccggatgattatttgcttagatgatggcgaatttttc atgtttgaactcatatatgaagatgatggggttaaagttaatgtatcagagtgtttatac aaaggtctaccgtgcaaggaaatattatgggtggaaggtgagttcctggccacgttcgcc gaaatggctgatggaacggttttcaaagtgggaaccgagaagctgcattggatgagttcc attcaaaatatagctccgatcttggatttctcagttgtggatgaccagaatgagaaacgt gaccaaatcttggcttgctgtggcgtaacgcctgaaggctctttaagaattatccgtagt ggcattaacgtagaaaagcttttgaaaaccgcacctgtttatcaaggaatcactggtact tggactgttaaaatgaagcttacggatgtgtaccattcgtttcttgttctgtcgtttgtt gaagagaccagggtcttatcagttgggttaagttttaaagatgtcaccgattcagttggt ttccagcctgatgtttgcaccttggcgtgtggactcgttgccgatggtttgttggttcag attcaccgagatgcaataaggctgtgcatccccaccgtggatgctcatgctgatggcatt cctgtttcttcaccgtttttctccccttggtttccagaaaatgtcagtatcagcttgggg gcagttggtgaaaatctgatagttgtgtccacgtctaacccttgttttctgtctattctc ggggtcaaatcagtatcatctcagtgctgcgaaatctatgagattcaacgagtaacattg cagtatgaagtttcctgcatctcaattcctcaaaaatatattggaaaaaagagacaccgc gcttcttccctggataatagttgtagcaaagctgcgattccttctggtatggagcgaggc tatacgtttctgattggcacacataagccttctgttgaggtcgtctccttctcagaagaa gatggtggtggtgttagagtccttgcttctgggatggtgtctctaacaaatacaatggga actgttatcagtggatgtattcctcaagatgtaaggctcgtgttagttgatcaagtttat gtcctttctgggttaagaaatggaatgctgctacgttttgagtggcctcccttttcacac tcatccggtcactgtaaagaagagatggacagtgttgtgagtgaccttctgttaattgcc acccgacgtatcggcatcacacctgtttttctggttccgttcagtgattcactagattca gacatcatagctcttagtgacaggccatggttgttacaaacagctcggcaaagcctttcc tacacttccatctcattccaaccttctacccatgcaactcctgtatgctcgcctgaatgc actcaaggaattctttttgttgcagagaactgtttacatctggtggagatggtgcacagc aaacggcttaatgcgcaaaagtttcaccttggaggcactccgcgaaaagttatctaccat agtgaaagcaaactattgattgtgatgagaactgatctgtatgatgcgtgtacgtctgat atatgctgtgtggacccgctaagtgggtcagtgttatcgtcctacaagctcaaacctgga gaaactggaaagtcaatggagcttgtacgtgtgggaaacgagcaggtccttgtggttggg acgagtttgtcttttggtcctgctatactacccagtggtgaagctgaaagtacaagagga cgattaatcattctctgcttagaacacactcacaactcggatagtggttcaatgacaatc tgctcaaaggctggttcatcttcccaacgcacatcgccttttcgtgatgttgtgggatgc acaacagagcaactatcaagcagtagtctctgcagcagtcctgatgataatagctatgat ggaatcaaaattgatgaatctgaaacatggcatttgagattggcctgtgcaacaacttgg cctggaatggtacttgcgatctgtccataccttgatcatttcttcctggcgtctgctggc aatgctttctatgtatgtggctttccgaacgatagtcctgagagaatgaaaaggtttgca gtgggaaggactcgtttcatgataacatctctgcgcacatacttcactagaattgttgtt gggggttgccgtgatggtgttctattctattcttatcacgaggatgtgaagaaacttcac caaatatattgtgatccagcgcagcggttagttggtgattgctttctaatggatgccaac tctgttgctgtatctgatcgcaaggggagtatagctatcttgtcttgcaaagatcattca gactttgaatattcaaatccggagtccaacctgaatctaaactgtgcttatcacatgggt gagattgccatggctatcaaaaagggttgcaacatttacaaacttccagctgacgatgtg ctgcgaagttatggtcttagtaaaagcattgacgcagctgatgacactatcatagccggc accctattgggaagtatattcgtctttgctccgatttcaagggaggaatatgagctccta gaagctgtccaagcaaagctcgtggtccatcctctgactgctcctgttcttggtaatgat cataaggagttccgaggtcgagagaatccgtcccaagcgacaaagattctggatggagac atgcttgctcagttcttggagcttacaaatagacagcaggagtcagttttatcgacgcct cagccatcctcaagcacattaaaatcaagttcaaagcaatgttcttctccgcctctcatg ctacaccaagttgtacaattgctagagcgtgtccattacgctctccactag

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