Brassica napus (rape): 106452611
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Entry
106452611 CDS
T04128
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106452611
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106452611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_EML
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Cytochrom_D1
WD40_Gbeta
Beta-prop_WDR75_1st
WDR54
PEP5_VPS11_N
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
106452611
NCBI-ProteinID:
XP_013750223
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Position
A5:complement(25626663..25629451)
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AA seq
532 aa
AA seq
DB search
MEVALEDNSLMDKVLPPDEQEIDVELEAKEKKYLRGEGANLETLKDKKLKTQLASREKLY
GKSAKAAAKIEKWLLPASAGYLETDGLEKTWRVKQTDIAKEVDILSSRNQYDIVLPDFGP
YKLDFTASGRHMLAGGRKGHLALVDMMSMNLIKEIQVRETVRDVAFLHNDQFFAAAQKKY
SYIYARDGTELHCLKERGPVARLRFLKNHFLLASVNKIGQLHYQDVTYGDMVASIRTGKG
RTDVMEVNPYNGVVALGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSLAFHHNGHLMATSG
KERKLKIWDLRKFEEVQTIHGFHAKTLSFSQKGLLAAGTGSFVQVLGDSSGDYSRYMSHS
MVKGYQIEKVMFRPYEDVLGIGHSMGWSSVLIPGSGEPNFDSWVANPFETTKQRREKEVH
LLLDKLPPETIMLDPSKIGAMRPSRRKERLTRGEIEAEKEVAVEAAKGVELKKKTKGRNK
PSKRTKKKKELVENAKRTFPEQENSAAGKKRRIGEDAAAELPACLKRFARKN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgctttagaggataacagtctcatggataaggtcttgcctcctgatgagcag
gagattgatgttgagctggaggctaaagagaagaagtatcttagaggagaaggtgctaat
ctagagacgttgaaagataagaaactaaagactcaacttgcttcacgagagaagttgtat
gggaagtctgctaaagctgctgctaaaatcgagaagtggctcttgccggcttcggcaggg
tacctggagactgatggtttagagaagacttggagggtcaagcagacagatattgccaaa
gaagtggatatattaagctcaagaaaccaatatgacattgtgcttccagattttggcccg
tacaaacttgattttactgcaagtggacggcatatgctagctggtggtcgcaaaggccac
cttgctcttgtagacatgatgagtatgaacctaattaaagagatccaggtaagagaaaca
gtacgtgatgttgcattcctgcacaatgaccaattctttgcagctgcccagaagaagtat
tcttatatctatgcgagagatggaactgaactccattgtttgaaggaacgtggtccagtg
gctagactcaggttcctaaagaaccatttcctcctcgcatcagtgaacaaaatcggtcag
ctacattaccaagacgtaacctacggagacatggtggctagtatccgaacaggcaaaggc
agaacagatgtaatggaagtgaatccttacaacggcgtcgtcgccttgggacactctggt
ggaaccgtcacaatgtggaaaccaacaagccaagcacctctagtccaaatgcagtgccac
cccggtccagtctcctctctcgctttccaccacaacggccacctcatggctacgtcaggc
aaagagcgcaaactcaagatctgggatctgcgcaagttcgaggaggttcagaccatccac
ggcttccacgccaagacgctgagtttcagccagaaaggtctgctagcagctggaacagga
tcgttcgtccaggttctaggagactcgagcggtgactatagcagatacatgagccactcg
atggtgaaaggctaccagatcgagaaggtcatgttcagaccgtacgaggacgttctgggg
atcggtcactcgatgggatggtccagcgttctcattccagggtctggagagccgaacttc
gattcttgggtggctaacccgtttgaaacgacgaagcagaggcgggagaaggaagtgcac
ttgcttcttgataagctcccgcctgagacgatcatgctggatccttctaagatcggtgcg
atgagaccttcgaggaggaaggagaggttgactagaggagagattgaagctgagaaagag
gtggcggtagaagcggcgaagggggttgagctgaagaagaagactaaaggaaggaataaa
ccgagtaagaggactaagaagaagaaagagttagtggagaacgcgaagagaacgttcccg
gagcaagagaacagtgctgctggtaagaagagaagaatcggtgaagatgctgcggctgag
ctacccgcttgtctgaaaaggtttgcccgaaaaaactga
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