Brassica napus (rape): 106452691
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Entry
106452691 CDS
T04128
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106452691
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106452691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Cytochrom_D1
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WDR54
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
106452691
NCBI-ProteinID:
XP_048615240
LinkDB
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Position
C5:complement(52204653..52207487)
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AA seq
534 aa
AA seq
DB search
MTMEVALEDNNLMEKVLPPDEQEIDVELEAKEKKYLRGEGANLETLKDKKLKTQLASREK
LYGKSAKAAAKIEKWLLPASAGYLETDGLEKTWRVKQTDIAKEVDILSSRNQYDIVLPDF
GPYKLDFTASGRHMLAGGRKGHLALVDMMSMNLIKEIQVRETVRDVAFLHNDQFFAAAQK
KYSYIYARDGTELHCLKERGPVARLRFLKNHFLLASVNKIGQLHYQDVTYGDMVASIRTG
KGRTDVMEVNPYNGVVALGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMAT
SGKERKLKIWDLRKFEEVQTIHGFHAKTLSFSQKGLLAAGTGSFVQVLGDSSGDYSRYMS
HSMVKGYQIEKVMFRPYEDVLGIGHSMGWSSVLIPGSGEPNFDSWVANPFETTKQRREKE
VHLLLDKLPPETIMLDPSKIGAMRPSRRKERPTRGEIEAEKEVAVEAAKGVELKKKTKGR
NKPSKRTKKKKELVENVKKTFPEQEQGAAGKKRRIGEDAAADLPSSLKRFARKN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaggtcgctttagaggataacaatctcatggagaaggtcttgcctcctgat
gagcaggagatcgatgttgagttggaggctaaagaaaagaagtatcttagaggagaaggt
gctaacttagagacgttgaaagataagaaactaaagactcaacttgcttcacgagaaaag
ttgtatgggaagtctgcaaaagctgctgctaaaatcgagaagtggctcttgccggcttca
gcagggtacttggagactgatggtttagagaagacatggcgggtcaagcagacagatatt
gccaaagaagttgatatattaagctcaagaaaccaatatgacattgtgctcccagatttt
ggcccgtacaaactcgattttactgcaagtggacggcatatgctagctggtggtcgcaaa
ggccaccttgctcttgtagacatgatgagtatgaacttaattaaagagatccaggtacgg
gaaacagtacgtgatgttgcattcctgcacaatgaccaattctttgcagctgcccagaag
aagtattcttatatttatgcgagagatggaactgagctccattgtttgaaggaacgtggt
ccagtggctagactcaggttcctaaagaaccatttcctcctcgcatcagtgaacaaaatc
ggacagctacactaccaagacgtaacctacggagacatggtggctagtatccgaacaggc
aaaggcagaacagatgtaatggaagtgaatccttacaacggtgtcgttgccttgggacac
tctggtggaaccgtcacaatgtggaaaccaacaagccaagcacctctagtccaaatgcag
tgccaccccggtccagtctcctccgtcgcgttccacccaaacggccacctcatggctacg
tcaggcaaagagcgcaaactcaagatctgggatctccgcaaattcgaggaggttcagacc
atccacggcttccacgccaagacgctgagtttcagccagaaaggtttgctagcagctgga
accggatcgttcgttcaggttctaggagactcgagcggtgactatagcagatacatgagc
cactcgatggtgaaaggctaccagatcgagaaggtgatgttcagaccgtacgaggacgtt
ctcgggatcggtcactcgatgggatggtccagcgttctcattccagggtctggagagccg
aacttcgattcctgggtggctaacccgttcgaaacgacgaagcagaggcgggagaaggaa
gtgcacttgctgctcgataagctcccgcccgagacgatcatgctggatccttctaagatc
ggtgcgatgaggccttcgaggaggaaggagaggccgacgagaggagagattgaagctgag
aaagaggtggcggtagaagcggcgaagggggttgagctgaagaagaagactaaaggaagg
aataaaccgagtaagaggactaagaagaagaaagagttggtggagaacgtgaagaagacg
ttcccggagcaagagcagggtgctgctggtaagaagagaaggatcggtgaagatgctgcg
gcagatctgccatcaagtttgaaaaggtttgcccgaaaaaactga
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