Brassica napus (rape): 106452749
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Entry
106452749 CDS
T04128
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106452749
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106452749
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106452749
NCBI-ProteinID:
XP_013750372
UniProt:
A0A078HXZ9
A0A078I6G9
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Position
A5:25958339..25960684
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AA seq
364 aa
AA seq
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MGNLHGLHRSHHHNAPFPPSPAPPSSTSPYVPNMTVEPYCHVDSSLRSLAGKAEGFGRAA
VGGLNGPVCHVTSLADEGPGSLREACKRPEPLWIVFDVSGTIHLSSFVNVSSHKTVDGRG
QRVKITGKGLRLKQSENVIICNLEFEGGVGPDADAIQIKPKSSTIWIDRCTLKNYYDGLI
DITRESTDITVSRCHFVNHNKTMLIGADPSHVTDRCIRVTIHHCFFDGTRQRHPRVRFAK
IHLFNNYTRNWSIYAVGAGVEAQVYSQCNIYEAGEKKTVFKYITEKAADKEEAEAGFIRS
EGDWFLNGAKSCLSHEKEHRVFSPTQHYSGWTVESSTEKLKKYIKHSTGWQNLPLPSDQL
PTTA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacttacatggtcttcacagatcccatcaccacaacgcccctttcccaccctct
ccagctcctccatcttcaacgtctccatacgttcccaacatgacggtggaaccttattgc
cacgtagactcaagcctccgctccctcgccggaaaggccgaaggtttcggacgcgccgcc
gttggtggtcttaatggtccggtttgccacgtcacttctttagctgacgaaggtccagga
tcgttacgagaggcttgtaagaggccagaaccgttatggattgtgtttgatgtgtctgga
acgatccatttatcttcgtttgtgaacgtatcatcccacaaaacggtggacggaagaggg
caacgggtgaagataacagggaaagggttaaggcttaaacaaagtgaaaacgttataata
tgtaaccttgaattcgaagggggtgtaggaccagacgcagacgctattcagatcaaacca
aaatcaagcaccatttggattgatcggtgtactctcaagaattactatgatggtttgatt
gatatcacacgagaaagcactgacattactgtctcaagatgtcatttcgtgaaccacaac
aagacaatgttgatcggcgcggacccaagtcacgtgacggaccgatgcataagagttacg
attcaccactgcttcttcgacggtacacgtcagcgacaccctcgtgttcgcttcgcaaaa
atccatctcttcaacaactacactcgtaactggtccatctatgctgtcggagccggcgtc
gaagctcaggtctattcccagtgcaacatatatgaagctggtgagaagaagactgtgttt
aagtacatcactgagaaggctgcggataaagaggaagccgaagctggttttataagatca
gaaggggattggttcttgaacggcgccaagtcgtgtcttagccacgaaaaagagcaccgc
gtgttctctccgactcaacactattctggatggaccgtcgagtcttcaacagagaaactc
aagaaatatattaaacactcgaccggctggcagaaccttccgcttccatctgaccaactc
ccaaccacagcataa
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