Brassica napus (rape): 106452770
Help
Entry
106452770 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106452770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106452770
03009 Ribosome biogenesis [BR:
bna03009
]
106452770
04131 Membrane trafficking [BR:
bna04131
]
106452770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106452770
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106452770
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106452770
Membrane trafficking [BR:
bna04131
]
SNARE
SNARE associated proteins
Others
106452770
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106452770
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106452770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
Vps4_C
AAA_lid_PRS2_C
AAA_7
NB-ARC
TsaE
NACHT
AAA_24
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
106452770
NCBI-ProteinID:
XP_013750400
UniProt:
A0A078HV46
LinkDB
All DBs
Position
C5:complement(52581823..52585287)
Genome browser
AA seq
808 aa
AA seq
DB search
MSNPAESSDSKPKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTICIALADESCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHIALGNSNPSALRETVVEVPNVSWD
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSEN
PEAMEEDMDDVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFETN
AGSGATTGVADPFATSAAAAADDDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccagctgaatcttcagactcgaaaccgaagaaggatttcagtactgctatt
cttgagaggaagaagtctccgaacagactcgtcgtcgatgaggccatcaacgatgataac
tccgttgtgtctctccaccctgctaccatggagaagctccagctcttccgtggtgatacc
attctcatcaagggtaagaaaaggaaggacaccatctgcatcgctcttgctgatgaatcg
tgtgaggagccaaagatcaggatgaacaaagtggtcaggtctaacttgagggttagactt
ggtgatgttatctctgttcaccaatgccctgatgtcaagtacggaaagcgtgtgcacatc
ttgcctgttgatgacactgttgaaggagtcactggaaacctctttgatgcttacctcaaa
ccttatttcttggaggcataccgtccggtgaggaagggcgatctcttcctagtgagagga
ggaatgaggagtgtggagtttaaagtcattgagacggatcctgctgagtactgcgtggtt
gctccggacactgagattttctgtgagggtgagccagtcaagagagaggatgaagaaagg
cttgatgaagtgggttatgatgatgttggtggagtcaggaagcagatggctcagatcagg
gagcttgttgagcttcccttgaggcaccctcagctgttcaagtcaattggtgttaagcca
ccgaagggaattttgctttatggaccacctgggtctggaaagactttgatcgctcgtgct
gttgctaacgaaacaggtgccttcttcttctgtatcaatgggcctgagatcatgtccaag
ctggctggtgagagtgagagcaacctcaggaaagcgtttgaggaggctgagaagaatgct
ccttcgatcatattcattgatgagatcgactctattgcaccgaaaagggagaagacgaat
ggagaggttgagaggaggattgtgtctcagctccttacgcttatggatgggctgaaatct
cgtgctcatgttattgtcatgggagcaaccaatcgccccaacagtatcgacccggctttg
agaaggtttggaagatttgatagggagattgatattggtgttcctgatgagattggacgt
cttgaagttctcaggatccatacaaagaacatgaagcttgctgaagatgttgatctagaa
aggatctcaaaggacacacacggttatgtcggtgctgatcttgcagctctgtgcactgaa
gctgccctgcaatgcatcagggagaagatggatgtaattgatttggaagatgactccata
gatgctgaaatcctcaattccatggcagtgaccaatgaacacttccacattgctctcggc
aacagcaacccatctgcacttcgtgaaactgttgtggaggttcccaatgtttcttgggat
gacattggaggtcttgagaatgtcaagagagagctccaggagactgttcaatacccagtc
gagcacccagagaagtttgagaagttcggtatgtctccatcaaagggagtccttttctac
ggtcctcctggatgtggtaaaacccttttggccaaagctatagccaacgagtgccaagca
aacttcatcagtgtcaaaggccctgagcttctcaccatgtggtttggagagagtgaagca
aatgtccgtgaaatctttgacaaggcccgtcagtctgctccatgtgttctcttctttgac
gagctcgactccattgcgactcagagaggaggtggaagcggaggtgatggtggcggtgca
gcggatagagtcctgaaccagcttttgactgagatggatggaatgaacgccaagaagact
gtcttcatcatcggagcaaccaacagacccgatattattgattctgctcttctccgtcca
ggaaggctcgaccagctcatttacattccactgccagacgaggattcccgtctcaatatc
ttcaaggcctgcttgaggaagtcacccatcgctaaagatgtagacatcaacgctctcgct
aagtacacacagggattcagtggtgctgatatcactgagatttgccagagggcttgcaag
tacgccatcagagaaaacatcgagaaggacattgaaaaggaaaagaggaggagcgagaac
ccagaagccatggaggaagatatggatgatgtatcagagataaaagctgcgcactttgag
gagtcgatgaagtatgcacgcaggagtgtgagtgatgcagacatcaggaagtaccaagcc
tttgctcagacgctgcagcagtctagagggtttggttccgagttcaggttcgagactaat
gctggttcaggtgctaccactggagtcgctgatccttttgccacgtctgcagctgctgct
gcggacgatgatgatctctacaattaa
DBGET
integrated database retrieval system
