Brassica napus (rape): 106453041
Help
Entry
106453041 CDS
T04128
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106453041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106453041
03029 Mitochondrial biogenesis [BR:
bna03029
]
106453041
Membrane trafficking [BR:
bna04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
106453041
Mitophagy
Scaffold proteins
106453041
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106453041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
IKKbetaNEMObind
DUF8156
Ecotin
DUF745
DUF3837
Motif
Other DBs
NCBI-GeneID:
106453041
NCBI-ProteinID:
XP_013750725
UniProt:
A0ABQ8AQQ0
LinkDB
All DBs
Position
C3:complement(69917392..69922457)
Genome browser
AA seq
1135 aa
AA seq
DB search
MSSSFTDDGNGKLILCVAENGHSFEFKCSEKTTSVESVMRFVESVSGIAFSDQLLLSLDM
RLEPQKLLSAFGLPSSDREVFVFNKSMLQSNSHPPSPEDVVDSQGVDDDHALPPASLHDH
HPLDDALDPALKALPLYERQFRYHFHRGRTFYNCTIVKHENCVRLTREQKVQQRAVEVAT
RNLEQYYRVIYHNFLEFMKRYKHQHRLHSDLLMNFERDIERLRSAKVHPCLLTDSRRCLL
DFVKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSVKNLEATVK
DHERFIDEQKSILQSLSKDVNTVKKLVDDCMSSQMSSSLRPHDAVSALGPMYEVHDKNHL
PKMQACYNSISELLGFCKNKKNEMNSFVHSYMQKITYVTYIIKDAKLQFPVFREAMVRQD
DLFADLKLLRGVGPAYRACLAEAVRRKASMKLYMGMAGQLIEKLAMKRETEVRRREEFLK
THGPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLINIEMADVDRYAPEYLVGLHSKFASS
RSSVGMSSDSETEEIGLDSFDDYLAASELVEIAGTSKKEVENAKLKADLASAISRICSLS
PQVEYEVLDESEAEKMLKIAAEKTAEALQAKDEYEKHLLSMLKEKQRRCDSYEKRIRELE
QRLNDDYLLGQRNINNNTDASGLKVTEYKAEASGDVEGNKAHVSGSEHMDEEGSCVSNLS
SKQPCKARERMDENMVDSSLVLSQPLDSSMLESQQNNEKGGKDNVMGEMGVFLSNSSTAE
SSPKSLNNNVATGVGLDTKQSDDIVLELRNELMEKSNKLSETESKLNGAMEEVASLSREL
GMNQKLLEESQMNCAHLENCLHEAREEAQTHLCAADRRASEYNTLRASSVKMRGLFERLR
SSVCAGGGVAGFAESFRTLAQALAKSINDNEDVGTVEFRKCIRVLADKVSILSKHWEESF
EKCRNLEATSDQARKDLEEKEELVKTLYTKHQLGKQANREKISFGRLEVHEIAAFVLNPA
GHYEAINRNCPTYYLSSESEALFTDHLPNRPTYIVGQIVHIERQAVKQQSPLSASASPEA
GKSDYLGSRTLASSSRSTSSSGTTPTNPYGLSSGCEYFIVTIAMLPDTAIHLQAS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaagcttcactgatgatggcaatggcaagcttattctctgtgtggctgagaat
ggccactcttttgagtttaaatgcagcgagaagacgacttcagttgagtctgtgatgcgt
ttcgttgagtctgtctctggcattgccttctctgaccagcttcttctctcgctggacatg
agacttgagccgcagaagctgctctctgctttcggacttccatctagtgacagagaagtg
tttgttttcaacaagtctatgctgcaaagcaactctcatccgccatcaccggaagatgtg
gtagattcacagggagttgatgatgatcatgctttaccacctgcttcattgcatgatcat
catcccttggatgatgcgttagacccggctttaaaggctttacctttgtatgagaggcag
tttcgttaccatttccatagaggccgcaccttctacaactgtactattgtgaagcatgag
aactgcgtgaggttaacgagagagcagaaggtgcagcagcgggctgttgaagttgctacg
aggaatctggaacagtattacagggtgatctatcacaactttcttgagttcatgaagcgt
tataagcatcaacaccgcctccactctgatttgctgatgaattttgaaagggatatcgag
aggttgaggtcggctaaggttcacccttgtctgctaactgattcgaggagatgcttgctg
gactttgtcaaggaggataacctcaagaaggctgtggagaattgtgcaagctctcacagg
cagtttgagaataagattgctcagttccagcagatgtttgtggaggtcaagcgcaaggta
gaggagttgtttgcttgcagggcttctttatcggtgaagaacttagaagcgactgttaag
gatcacgaacgcttcattgacgagcaaaagagcatattgcaatctctcagcaaagatgtc
aatacggttaagaagcttgtggatgattgcatgtctagccagatgtcctcgtctctccga
cctcatgatgctgtttcagccctgggtcctatgtacgaagtgcatgataagaaccacctt
cccaagatgcaggcttgttataactctatctctgaattgctgggtttctgcaagaacaag
aagaacgagatgaacagctttgtacacagctacatgcaaaagataacgtatgtcacatat
atcatcaaagatgctaagttacagtttcctgtttttagagaggcaatggtgcgtcaggat
gacttatttgcagacctgaagttactccgtggtgttggccctgcatatagagcctgcctc
gcagaggcggtgagaagaaaagcctctatgaagctgtacatgggaatggctgggcagttg
atagagaagcttgctatgaagagggaaacagaggtcaggagacgtgaggagtttctaaag
acgcatggtccctttgtacctcgtgacgtgttggcctcaatgggtttatatgatacgccc
actcagtgtgatgtcaatgtagctccttatgatacaagtttgatcaatattgaaatggct
gacgttgatcgatatgctcctgagtatctagttgggttacattcaaagtttgcatcctca
aggagttcagtgggcatgtctagtgatagtgagactgaggagataggtttagacagtttt
gatgattacctagcggcctctgaattagtggagatagctggaaccagcaagaaggaagtt
gagaatgcaaaactgaaagctgacctcgcttctgcaatctctaggatttgttcattaagc
ccacaagttgaatatgaggtgctggatgaaagtgaagcagaaaagatgttgaaaattgcc
gcagagaagacagcagaggcgctgcaggccaaagatgagtatgagaaacatctcttatct
atgctcaaggaaaaacaaagacgttgtgattcatatgagaagcgaatccgtgaactggaa
caacgtctcaacgatgattatctactgggacagagaaatattaataataatacggatgcg
tctggcttgaaagttactgagtacaaagcagaagcttcaggtgacgtggaaggcaacaaa
gctcatgtatctggctcggagcacatggatgaggagggctcatgtgtttcaaatctctct
agcaagcagccatgtaaggctcgggaacgtatggatgagaatatggtggattcctctctg
gtgctcagtcaaccgcttgattcatcaatgctggaaagccagcaaaataatgagaaaggt
ggaaaggataatgtgatgggggagatgggtgtgtttctaagtaacagctcgacagccgag
agctcaccaaaatctttgaataataatgtggcgactggcgtaggtttggataccaaacag
agtgatgatattgtcttggaacttagaaatgagctgatggagaagtccaataaactgagt
gagacagagtccaagctaaatggagctatggaagaggtagccagtctgagcagagagttg
ggaatgaatcagaagcttctcgaagaatcccagatgaactgtgcgcatttggagaactgc
ttacatgaagcaagagaagaagcccagacccatctctgcgctgctgatcgtcgagcttct
gagtacaatacacttcgcgcatcatctgtgaagatgcgaggcctctttgaaagactccga
agctccgtctgtgctggtggtggggttgctggttttgccgaatcctttcgtactttggct
caagctttagccaagtccattaatgacaatgaagatgtgggtactgttgagttccggaaa
tgcatccgagtcctggcggacaaagttagtatcctctccaaacactgggaggaatctttt
gaaaagtgccggaatcttgaagctacaagtgaccaggcaaggaaggacttggaggaaaag
gaagagctggtgaaaacattgtacactaagcatcaacttgggaagcaggctaatagagaa
aagatatcattcggtcgtcttgaagtccatgagatagcagcatttgtgctgaatccagca
gggcattacgaggcgatcaacaggaactgcccaacctactacttgtcctctgaatccgag
gcactgttcacagatcacctcccaaaccggcctacatacatcgttggacagattgtccac
atcgagcgccaagcagtgaagcagcaatcaccgctttcagcttctgcatctccagaggcg
ggtaagtcggactatctcggctcaagaactctggcatcaagctcaaggtcaacatcatct
tcaggaacgacaccaacaaacccttatggtctctcttcaggatgtgaatacttcattgtg
acaatagcaatgcttcctgacactgccattcatctacaagcttcctga
DBGET
integrated database retrieval system
